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Summary
Structure Feature
Experiment
Ligands & Environment
4CJ8
pdb_00004cj8
10.2210/pdb4cj8/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
1PE
A2G
GOL
NGA
SO4
UD2
UDP
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
NGA
IUPAC Name:
2-acetamido-2-deoxy-beta-D-galactopyranose
Formal Charge:
0
Type:
D-saccharide, beta linking
Substructure
Substruture Type:
MurckoScaffold
SMILES:
C1CCOCC1
InChI:
InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key:
DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula:
C8 H15 N O6
Molecular weight:
221.208
Hydrogen Bond Acceptor:
6
Hydrogen Bond Donor:
5
Rotatable Bonds:
7
Heavy Atoms:
15
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
2-(acetylamino)-2-deoxy-beta-D-galactopyranose
OpenEye OEToolkits
1.6.1
N-[(2R,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide
GMML
1.0
DGalpNAcb
GMML
1.0
N-acetyl-b-D-galactopyranosamine
PDB-CARE
1.0
b-D-GalpNAc
GMML
1.0
GalNAc
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
O=C(NC1C(O)C(O)C(OC1O)CO)C
SMILES_CANONICAL
CACTVS
3.352
CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@H](O)[C@@H]1O
SMILES
CACTVS
3.352
CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O
SMILES_CANONICAL
OpenEye OEToolkits
1.7.0
CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@H]1O)CO)O)O
SMILES
OpenEye OEToolkits
1.7.0
CC(=O)NC1C(C(C(OC1O)CO)O)O
InChI
InChI
1.03
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6+,7-,8-/m1/s1
InChIKey
InChI
1.03
OVRNDRQMDRJTHS-JAJWTYFOSA-N
Chemical Database Mapping
Database
Reference ID
ChEMBL
CHEMBL39064
PubChem
440552
ChEBI
28497
ZINC
ZINC000003861733
SureChEMBL
SCHEMBL152744
HMDB
HMDB0000853
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