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Summary
Structure Feature
Experiment
Ligands & Environment
4CJ8
pdb_00004cj8
10.2210/pdb4cj8/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
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MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
1PE
A2G
GOL
NGA
SO4
UD2
UDP
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
A2G
IUPAC Name:
2-acetamido-2-deoxy-alpha-D-galactopyranose
Formal Charge:
0
Type:
D-saccharide, alpha linking
Substructure
Substruture Type:
MurckoScaffold
SMILES:
C1CCOCC1
InChI:
InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key:
DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula:
C8 H15 N O6
Molecular weight:
221.208
Hydrogen Bond Acceptor:
6
Hydrogen Bond Donor:
5
Rotatable Bonds:
7
Heavy Atoms:
15
Systematic name
Program
Version
Descriptor
ACDLabs
12.01
2-(acetylamino)-2-deoxy-alpha-D-galactopyranose
OpenEye OEToolkits
1.7.0
N-[(2S,3R,4R,5R,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide
GMML
1.0
DGalpNAca
GMML
1.0
N-acetyl-a-D-galactopyranosamine
PDB-CARE
1.0
a-D-GalpNAc
GMML
1.0
GalNAc
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
12.01
O=C(NC1C(O)C(O)C(OC1O)CO)C
SMILES_CANONICAL
CACTVS
3.370
CC(=O)N[C@H]1[C@@H](O)O[C@H](CO)[C@H](O)[C@@H]1O
SMILES
CACTVS
3.370
CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O
SMILES_CANONICAL
OpenEye OEToolkits
1.7.0
CC(=O)N[C@@H]1[C@H]([C@H]([C@H](O[C@@H]1O)CO)O)O
SMILES
OpenEye OEToolkits
1.7.0
CC(=O)NC1C(C(C(OC1O)CO)O)O
InChI
InChI
1.03
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6+,7-,8+/m1/s1
InChIKey
InChI
1.03
OVRNDRQMDRJTHS-CBQIKETKSA-N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB03567
ChEMBL
CHEMBL1230702
PubChem
84265
ChEBI
40356
ZINC
ZINC000002562219
SureChEMBL
SCHEMBL262932
HMDB
HMDB0000212
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