Structural Complex
Chemical ID: YC6
IUPAC Name: 1-(2-deoxy-alpha-D-erythro-pentofuranosyl)-5-methylpyrimidine-2,4(1H,3H)-dione
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@@H]2CCCO2)c(=O)[nH]1
InChI: InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m0/s1
InChI Key: CWWIKVUHBBTKHC-ZETCQYMHSA-N
Physiochemical Descriptor:
Formula: C10 H12 N2 O6
Molecular weight: 256.212
Hydrogen Bond Acceptor: 7
Hydrogen Bond Donor: 3
Rotatable Bonds: 5
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-(2-deoxy-alpha-D-erythro-pentofuranosyl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carbaldehyde
OpenEye OEToolkits 2.0.7 1-[(2~{S},4~{S},5~{R})-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-2,4-bis(oxidanylidene)pyrimidine-5-carbaldehyde
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=CC1=CN(C(=O)NC1=O)C1CC(O)C(CO)O1
InChI InChI 1.06 InChI=1S/C10H12N2O6/c13-3-5-2-12(10(17)11-9(5)16)8-1-6(15)7(4-14)18-8/h2-3,6-8,14-15H,1,4H2,(H,11,16,17)/t6-,7+,8-/m0/s1
InChIKey InChI 1.06 MVORBLZUGBSUNB-RNJXMRFFSA-N
SMILES_CANONICAL CACTVS 3.385 OC[C@H]1O[C@@H](C[C@@H]1O)N2C=C(C=O)C(=O)NC2=O
SMILES CACTVS 3.385 OC[CH]1O[CH](C[CH]1O)N2C=C(C=O)C(=O)NC2=O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C1[C@@H]([C@H](O[C@@H]1N2C=C(C(=O)NC2=O)C=O)CO)O
SMILES OpenEye OEToolkits 2.0.7 C1C(C(OC1N2C=C(C(=O)NC2=O)C=O)CO)O
Chemical Database Mapping
Database Reference ID
PubChem 16074052