ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: THM

IUPAC Name: THYMIDINE

Formal Charge: 0

Type: DNA OH 5 prime terminus

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ccn([C@H]2CCCO2)c(=O)[nH]1

InChI: InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1

InChI Key: CWWIKVUHBBTKHC-SSDOTTSWSA-N

Physiochemical Descriptor:

Formula: C10 H14 N2 O5

Molecular weight: 242.229

Hydrogen Bond Acceptor: 6

Hydrogen Bond Donor: 3

Rotatable Bonds: 5

Heavy Atoms: 17

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	thymidine
OpenEye OEToolkits	1.5.0	1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-pyrimidine-2,4-dione

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1NC(=O)N(C=C1C)C2OC(C(O)C2)CO
SMILES_CANONICAL	CACTVS	3.341	CC1=CN([C@H]2C[C@H](O)[C@@H](CO)O2)C(=O)NC1=O
SMILES	CACTVS	3.341	CC1=CN([CH]2C[CH](O)[CH](CO)O2)C(=O)NC1=O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CO)O
SMILES	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)O
InChI	InChI	1.03	InChI=1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)/t6-,7+,8+/m0/s1
InChIKey	InChI	1.03	IQFYYKKMVGJFEH-XLPZGREQSA-N

Chemical Database Mapping