Structural Complex
Chemical ID: GAO
IUPAC Name: GUANINE ARABINOSE-5'-PHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula: C10 H14 N5 O8 P
Molecular weight: 363.221
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 6
Rotatable Bonds: 9
Heavy Atoms: 24
Systematic name
Program Version Descriptor
ACDLabs 10.04 2-amino-9-(5-O-phosphono-beta-D-arabinofuranosyl)-1,9-dihydro-6H-purin-6-one
OpenEye OEToolkits 1.5.0 [(2R,3S,4S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3O)COP(=O)(O)O
SMILES_CANONICAL CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3O
SMILES CACTVS 3.341 NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc2c(n1[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=C(NC2=O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)O)O)N=C(NC2=O)N
InChI InChI 1.03 InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6+,9-/m1/s1
InChIKey InChI 1.03 RQFCJASXJCIDSX-FJFJXFQQSA-N
Chemical Database Mapping
Database Reference ID
PubChem 135603658
ZINC ZINC000012501413