Structural Complex
Chemical ID: A1CWA
IUPAC Name: (2-azanylimidazol-1-yl)-[[(2~{R},3~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy]phosphinic acid
Formal Charge: 0
Type: DNA linking
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CC[C@@H](CO[PH](=O)n2ccnc2)O1
InChI: InChI=1S/C13H15N6O4P/c20-13-11-12(15-6-16-13)19(8-17-11)10-2-1-9(23-10)5-22-24(21)18-4-3-14-7-18/h3-4,6-10,24H,1-2,5H2,(H,15,16,20)/t9-,10+/m0/s1
InChI Key: FXTCZHADESZLOC-VHSXEESVSA-N
Physiochemical Descriptor:
Formula: C13 H17 N8 O6 P
Molecular weight: 412.298
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 5
Rotatable Bonds: 9
Heavy Atoms: 28
Systematic name
Program Version Descriptor
ACDLabs 14.52 5'-O-[(R)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]-2'-deoxyguanosine
OpenEye OEToolkits 3.1.0.0 (2-azanylimidazol-1-yl)-[[(2~{R},3~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy]phosphinic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 14.52 Nc1nccn1P(=O)(O)OCC1OC(CC1O)n1cnc2c1N=C(N)NC2=O
InChI InChI 1.06 InChI=1S/C13H17N8O6P/c14-12-18-10-9(11(23)19-12)17-5-20(10)8-3-6(22)7(27-8)4-26-28(24,25)21-2-1-16-13(21)15/h1-2,5-8,22H,3-4H2,(H2,15,16)(H,24,25)(H3,14,18,19,23)/t6-,7+,8+/m0/s1
InChIKey InChI 1.06 UDDIXTSYRLRNQW-XLPZGREQSA-N
SMILES_CANONICAL CACTVS 3.385 NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)n4ccnc4N)O3
SMILES CACTVS 3.385 NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)n4ccnc4N)O3
SMILES_CANONICAL OpenEye OEToolkits 3.1.0.0 c1cn(c(n1)N)P(=O)(O)OC[C@@H]2[C@H](C[C@@H](O2)n3cnc4c3N=C(NC4=O)N)O
SMILES OpenEye OEToolkits 3.1.0.0 c1cn(c(n1)N)P(=O)(O)OCC2C(CC(O2)n3cnc4c3N=C(NC4=O)N)O