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Structural Complex
Chemical ID: A1JK7
IUPAC Name: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{S})-5-[5-[[3-[[2-[2-(4,6-dimethylpyrimidin-2-yl)sulfanylethanoylamino]-1,3-thiazol-5-yl]methyl]phenoxy]methyl]-3-(2-methoxyethyl)-1$l^{4},2,3-triazacyclopenta-1,4-dien-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Formal Charge: 1
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(CSc1ncccn1)Nc1ncc(Cc2cccc(OCc3c[nH]n[n+]3[C@@H]3CC[C@@H](CO[PH](=O)O[PH](=O)OC[C@@H]4CC[C@H](n5cnc6cncnc65)O4)O3)c2)s1
InChI: InChI=1S/C34H37N11O9P2S2/c46-29(19-57-33-36-9-2-10-37-33)42-34-38-14-27(58-34)12-22-3-1-4-24(11-22)49-16-23-13-41-43-45(23)31-8-6-26(53-31)18-51-56(48)54-55(47)50-17-25-5-7-30(52-25)44-21-40-28-15-35-20-39-32(28)44/h1-4,9-11,13-15,20-21,25-26,30-31,55-56H,5-8,12,16-19H2,(H,38,42,46)/p+1/t25-,26-,30+,31-/m0/s1
InChI Key: XZCXCKMLMOBLKE-KTQSXMKOSA-O
Physiochemical Descriptor:
Formula: C39 H49 N12 O16 P2 S2
Molecular weight: 1067.955
Hydrogen Bond Acceptor: 28
Hydrogen Bond Donor: 8
Rotatable Bonds: 32
Heavy Atoms: 71
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{S})-5-[5-[[3-[[2-[2-(4,6-dimethylpyrimidin-2-yl)sulfanylethanoylamino]-1,3-thiazol-5-yl]methyl]phenoxy]methyl]-3-(2-methoxyethyl)-1,2,3-triazol-1-ium-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C39H48N12O16P2S2/c1-20-9-21(2)46-39(45-20)70-17-28(52)47-38-41-12-25(71-38)11-22-5-4-6-24(10-22)62-14-23-13-49(7-8-61-3)48-51(23)37-33(56)31(54)27(66-37)16-64-69(59,60)67-68(57,58)63-15-26-30(53)32(55)36(65-26)50-19-44-29-34(40)42-18-43-35(29)50/h4-6,9-10,12-13,18-19,26-27,30-33,36-37,53-56H,7-8,11,14-17H2,1-3H3,(H4-,40,41,42,43,47,52,57,58,59,60)/p+1/t26-,27-,30-,31-,32-,33-,36-,37+/m1/s1
InChIKey InChI 1.06 XBMFFUZZZNZECK-XRRLOKFRSA-O
SMILES_CANONICAL CACTVS 3.385 COCCn1cc(COc2cccc(Cc3sc(NC(=O)CSc4nc(C)cc(C)n4)nc3)c2)[n+](n1)[C@H]5O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]6O[C@H]([C@H](O)[C@@H]6O)n7cnc8c(N)ncnc78)[C@@H](O)[C@H]5O
SMILES CACTVS 3.385 COCCn1cc(COc2cccc(Cc3sc(NC(=O)CSc4nc(C)cc(C)n4)nc3)c2)[n+](n1)[CH]5O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]6O[CH]([CH](O)[CH]6O)n7cnc8c(N)ncnc78)[CH](O)[CH]5O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(n[n+]4[C@@H]5[C@@H]([C@@H]([C@H](O5)COP(=O)(O)OP(=O)(O)OC[C@@H]6[C@H]([C@H]([C@@H](O6)n7cnc8c7ncnc8N)O)O)O)O)CCOC)C
SMILES OpenEye OEToolkits 2.0.7 Cc1cc(nc(n1)SCC(=O)Nc2ncc(s2)Cc3cccc(c3)OCc4cn(n[n+]4C5C(C(C(O5)COP(=O)(O)OP(=O)(O)OCC6C(C(C(O6)n7cnc8c7ncnc8N)O)O)O)O)CCOC)C
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