Structural Complex
Chemical ID: A1CGJ
IUPAC Name: 2-amino-1-[(R)-{[(2R,3S,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium (non-preferred name)
Formal Charge: 1
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CC[C@@H](CO[PH](=O)n2cc[n+]([PH](=O)OC[C@@H]3CC[C@H](n4cnc5c(=O)[nH]cnc54)O3)c2)O1
InChI: InChI=1S/C23H26N10O8P2/c34-22-18-20(24-9-26-22)32(11-28-18)16-3-1-14(40-16)7-38-42(36)30-5-6-31(13-30)43(37)39-8-15-2-4-17(41-15)33-12-29-19-21(33)25-10-27-23(19)35/h5-6,9-17,42-43H,1-4,7-8H2,(H-,24,25,26,27,34,35)/p+1/t14-,15-,16+,17+/m0/s1
InChI Key: VKVPHZNGUDERCP-MWDXBVQZSA-O
Physiochemical Descriptor:
Formula: C23 H30 N13 O12 P2
Molecular weight: 742.512
Hydrogen Bond Acceptor: 22
Hydrogen Bond Donor: 9
Rotatable Bonds: 17
Heavy Atoms: 50
Systematic name
Program Version Descriptor
ACDLabs 14.52 2-amino-1-[(R)-{[(2R,3S,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-3-[(S)-{[(2R,3S,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]-1H-imidazol-3-ium (non-preferred name)
OpenEye OEToolkits 3.1.0.0 [2-azanyl-3-[[(2~{R},3~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]imidazol-1-ium-1-yl]-[[(2~{R},3~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy]phosphinic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 14.52 NC1=Nc2c(ncn2C2CC(O)C(O2)COP(=O)(O)[n+]2ccn(c2N)P(=O)(O)OCC2OC(CC2O)n2cnc3c2N=C(N)NC3=O)C(=O)N1
InChI InChI 1.06 InChI=1S/C23H29N13O12P2/c24-21-29-17-15(19(39)31-21)27-7-33(17)13-3-9(37)11(47-13)5-45-49(41,42)35-1-2-36(23(35)26)50(43,44)46-6-12-10(38)4-14(48-12)34-8-28-16-18(34)30-22(25)32-20(16)40/h1-2,7-14,26,37-38H,3-6H2,(H8,24,25,29,30,31,32,39,40,41,42,43,44)/p+1/t9-,10-,11+,12+,13+,14+/m0/s1
InChIKey InChI 1.06 BXQAVRYERMHLCD-PRSXHHODSA-O
SMILES_CANONICAL CACTVS 3.385 NC1=Nc2n(cnc2C(=O)N1)[C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)n4cc[n+](c4N)[P](O)(=O)OC[C@H]5O[C@H](C[C@@H]5O)n6cnc7C(=O)NC(=Nc67)N)O3
SMILES CACTVS 3.385 NC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(=O)n4cc[n+](c4N)[P](O)(=O)OC[CH]5O[CH](C[CH]5O)n6cnc7C(=O)NC(=Nc67)N)O3
SMILES_CANONICAL OpenEye OEToolkits 3.1.0.0 c1c[n+](c(n1P(=O)(O)OC[C@@H]2[C@H](C[C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)N)P(=O)(O)OC[C@@H]5[C@H](C[C@@H](O5)n6cnc7c6N=C(NC7=O)N)O
SMILES OpenEye OEToolkits 3.1.0.0 c1c[n+](c(n1P(=O)(O)OCC2C(CC(O2)n3cnc4c3N=C(NC4=O)N)O)N)P(=O)(O)OCC5C(CC(O5)n6cnc7c6N=C(NC7=O)N)O