ISDA: 9LSN

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: A1EL7

IUPAC Name: [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)thieno[3,2-d]pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Formal Charge: 0

Type: RNA linking

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1[nH]c(=O)n([C@H]2CCCO2)c2ccsc12

InChI: InChI=1S/C10H10N2O3S/c13-9-8-6(3-5-16-8)12(10(14)11-9)7-2-1-4-15-7/h3,5,7H,1-2,4H2,(H,11,13,14)/t7-/m1/s1

InChI Key: YAGCHGWSQGASOM-SSDOTTSWSA-N

Physiochemical Descriptor:

Formula: C11 H13 N2 O9 P S

Molecular weight: 380.268

Hydrogen Bond Acceptor: 11

Hydrogen Bond Donor: 5

Rotatable Bonds: 8

Heavy Atoms: 24

Systematic name

Program	Version	Descriptor
OpenEye OEToolkits	2.0.7	[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)thieno[3,2-d]pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
InChI	InChI	1.06	InChI=1S/C11H13N2O9PS/c14-6-5(3-21-23(18,19)20)22-10(7(6)15)13-4-1-2-24-8(4)9(16)12-11(13)17/h1-2,5-7,10,14-15H,3H2,(H,12,16,17)(H2,18,19,20)/t5-,6-,7-,10-/m1/s1
InChIKey	InChI	1.06	XFFDXJGTTZQTKV-DAGMQNCNSA-N
SMILES_CANONICAL	CACTVS	3.385	O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C(=O)NC(=O)c3sccc23
SMILES	CACTVS	3.385	O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)N2C(=O)NC(=O)c3sccc23
SMILES_CANONICAL	OpenEye OEToolkits	2.0.7	c1csc2c1N(C(=O)NC2=O)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
SMILES	OpenEye OEToolkits	2.0.7	c1csc2c1N(C(=O)NC2=O)C3C(C(C(O3)COP(=O)(O)O)O)O

Chemical Database Mapping

Database	Reference ID
PubChem	73386827
SureChEMBL	SCHEMBL17369136