Home
About
Browse
Covid-19
Organism Classification
Alphafold Collection
Virus Classification
Indian Data
Documentation
Contact
Search Type
PDB Id
Uniprot Id
Source Organism
Host Organism
Protein Name
Method
Maintenance Mode:
Some services may turn out to be unavailable. We apologize for the inconvenience!
Summary
Structure Feature
Experiment
Ligands & Environment
9J03
pdb_00009j03
10.2210/pdb9j03/pdb
Download file
FASTA
PDB
MMCIF
Binary MMCIF
XML
Structure Factors
Full Validation Report
Validation File (XML)
Validation File (CIF)
FASTA Zipped(.gz)
PDB Zipped(.gz)
MMCIF Zipped(.gz)
Binary MMCIF Zipped(.gz)
Structure Factors Zipped(.gz)
Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
2IL
GP4
NAG
X6Z
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
X6Z
IUPAC Name:
[(2~{R},3~{S},4~{S},5~{S})-5-methoxy-3,4,6-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate
Formal Charge:
0
Type:
D-saccharide, alpha linking
Substructure
Substruture Type:
MurckoScaffold
SMILES:
C1CCOCC1
InChI:
InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key:
DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula:
C7 H15 O9 P
Molecular weight:
274.162
Hydrogen Bond Acceptor:
9
Hydrogen Bond Donor:
5
Rotatable Bonds:
10
Heavy Atoms:
17
Systematic name
Program
Version
Descriptor
OpenEye OEToolkits
2.0.7
[(2~{R},3~{S},4~{S},5~{S})-5-methoxy-3,4,6-tris(oxidanyl)oxan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type
Program
Version
Descriptor
InChI
InChI
1.06
InChI=1S/C7H15O9P/c1-14-6-5(9)4(8)3(16-7(6)10)2-15-17(11,12)13/h3-10H,2H2,1H3,(H2,11,12,13)/t3-,4-,5+,6+,7+/m1/s1
InChIKey
InChI
1.06
KJZYYYMWKHTJAM-VEIUFWFVSA-N
SMILES_CANONICAL
CACTVS
3.385
CO[C@@H]1[C@@H](O)O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]1O
SMILES
CACTVS
3.385
CO[CH]1[CH](O)O[CH](CO[P](O)(O)=O)[CH](O)[CH]1O
SMILES_CANONICAL
OpenEye OEToolkits
2.0.7
CO[C@H]1[C@H]([C@@H]([C@H](OC1O)COP(=O)(O)O)O)O
SMILES
OpenEye OEToolkits
2.0.7
COC1C(C(C(OC1O)COP(=O)(O)O)O)O
Feedback
Feedback Form
Name
Email
Institute
Feedback
Submit