ISDA: 9C4G

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: CLY

IUPAC Name: CLINDAMYCIN

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: O=C(NC[C@@H]1CCCCO1)[C@@H]1CCCN1

InChI: InChI=1S/C11H20N2O2/c14-11(10-5-3-6-12-10)13-8-9-4-1-2-7-15-9/h9-10,12H,1-8H2,(H,13,14)/t9-,10-/m0/s1

InChI Key: PXRRDGDUSZYTNQ-UWVGGRQHSA-N

Physiochemical Descriptor:

Formula: C18 H33 Cl N2 O5 S

Molecular weight: 424.983

Hydrogen Bond Acceptor: 7

Hydrogen Bond Donor: 4

Rotatable Bonds: 14

Heavy Atoms: 27

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	methyl 7-chloro-6,7,8-trideoxy-6-{[(4R)-1-methyl-4-propyl-L-prolyl]amino}-1-thio-L-threo-alpha-D-galacto-octopyranoside
OpenEye OEToolkits	1.5.0	(1R,2S,4R)-N-[(1S,2S)-2-chloro-1-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-methylsulfanyl-oxan-2-yl]propyl]-1-methyl-4-propyl-pyrrolidine-2-carboxamide

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	ClC(C)C(NC(=O)C1N(C)CC(CCC)C1)C2OC(SC)C(O)C(O)C2O
SMILES_CANONICAL	CACTVS	3.341	CCC[C@@H]1C[C@H](N(C)C1)C(=O)N[C@H]([C@H](C)Cl)[C@H]2O[C@H](SC)[C@H](O)[C@@H](O)[C@H]2O
SMILES	CACTVS	3.341	CCC[CH]1C[CH](N(C)C1)C(=O)N[CH]([CH](C)Cl)[CH]2O[CH](SC)[CH](O)[CH](O)[CH]2O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	CCC[C@@H]1C[C@H]([N@@](C1)C)C(=O)N[C@@H]([C@@H]2[C@@H]([C@@H]([C@H]([C@H](O2)SC)O)O)O)[C@H](C)Cl
SMILES	OpenEye OEToolkits	1.5.0	CCCC1CC(N(C1)C)C(=O)NC(C2C(C(C(C(O2)SC)O)O)O)C(C)Cl
InChI	InChI	1.03	InChI=1S/C18H33ClN2O5S/c1-5-6-10-7-11(21(3)8-10)17(25)20-12(9(2)19)16-14(23)13(22)15(24)18(26-16)27-4/h9-16,18,22-24H,5-8H2,1-4H3,(H,20,25)/t9-,10+,11-,12+,13-,14+,15+,16+,18+/m0/s1
InChIKey	InChI	1.03	KDLRVYVGXIQJDK-AWPVFWJPSA-N

Chemical Database Mapping