Structural Complex
Chemical ID: YBI
IUPAC Name: ~{N}-[4-[6-[3-[4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoyl]piperazin-1-yl]propoxy]-1~{H}-benzimidazol-2-yl]cyclohexyl]-2-(1~{H}-indol-2-ylmethylamino)ethanamide
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(CNCc1cc2ccccc2[nH]1)N[C@H]1CC[C@@H](c2nc3ccc(OCCCN4CCN(C(=O)C[C@@H]5N=C(c6ccccc6)c6ccsc6-n6cnnc65)CC4)cc3[nH]2)CC1
InChI: InChI=1S/C47H51N11O3S/c59-42(29-48-28-35-25-33-9-4-5-10-38(33)50-35)51-34-13-11-32(12-14-34)45-53-39-16-15-36(26-40(39)54-45)61-23-6-18-56-19-21-57(22-20-56)43(60)27-41-46-55-49-30-58(46)47-37(17-24-62-47)44(52-41)31-7-2-1-3-8-31/h1-5,7-10,15-17,24-26,30,32,34,41,48,50H,6,11-14,18-23,27-29H2,(H,51,59)(H,53,54)/t32-,34+,41-/m0/s1
InChI Key: JBYNFLFMCVLIAP-RPCXKGGPSA-N
Physiochemical Descriptor:
Formula: C50 H56 Cl N11 O3 S
Molecular weight: 926.570
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 4
Rotatable Bonds: 17
Heavy Atoms: 66
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 ~{N}-[4-[6-[3-[4-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoyl]piperazin-1-yl]propoxy]-1~{H}-benzimidazol-2-yl]cyclohexyl]-2-(1~{H}-indol-2-ylmethylamino)ethanamide
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C50H56ClN11O3S/c1-30-31(2)66-50-46(30)47(33-9-13-36(51)14-10-33)55-43(49-59-58-32(3)62(49)50)27-45(64)61-22-20-60(21-23-61)19-6-24-65-39-17-18-41-42(26-39)57-48(56-41)34-11-15-37(16-12-34)54-44(63)29-52-28-38-25-35-7-4-5-8-40(35)53-38/h4-5,7-10,13-14,17-18,25-26,34,37,43,52-53H,6,11-12,15-16,19-24,27-29H2,1-3H3,(H,54,63)(H,56,57)/t34-,37+,43-/m0/s1
InChIKey InChI 1.06 WIURLZYDRMMHFO-BPKRYYIFSA-N
SMILES_CANONICAL CACTVS 3.385 Cc1sc2n3c(C)nnc3[C@H](CC(=O)N4CCN(CCCOc5ccc6nc([nH]c6c5)[C@H]7CC[C@H](CC7)NC(=O)CNCc8[nH]c9ccccc9c8)CC4)N=C(c%10ccc(Cl)cc%10)c2c1C
SMILES CACTVS 3.385 Cc1sc2n3c(C)nnc3[CH](CC(=O)N4CCN(CCCOc5ccc6nc([nH]c6c5)[CH]7CC[CH](CC7)NC(=O)CNCc8[nH]c9ccccc9c8)CC4)N=C(c%10ccc(Cl)cc%10)c2c1C
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)N4CCN(CC4)CCCOc5ccc6c(c5)[nH]c(n6)C7CCC(CC7)NC(=O)CNCc8cc9ccccc9[nH]8)c1ccc(cc1)Cl)C
SMILES OpenEye OEToolkits 2.0.7 Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)N4CCN(CC4)CCCOc5ccc6c(c5)[nH]c(n6)C7CCC(CC7)NC(=O)CNCc8cc9ccccc9[nH]8)c1ccc(cc1)Cl)C