Structural Complex
Chemical ID: U56
IUPAC Name: N-hydroxycytidine
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@H]1CCCO1
InChI: InChI=1S/C8H10N2O2/c11-8-9-4-2-5-10(8)7-3-1-6-12-7/h2,4-5,7H,1,3,6H2/t7-/m1/s1
InChI Key: AKXKPKRAUWTVBW-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C9 H13 N3 O6
Molecular weight: 259.216
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 5
Rotatable Bonds: 7
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 12.01 N-hydroxycytidine
OpenEye OEToolkits 2.0.7 1-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-4-(oxidanylamino)pyrimidin-2-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 ONC1=NC(=O)N(C=C1)C1OC(CO)C(O)C1O
InChI InChI 1.06 InChI=1S/C9H13N3O6/c13-3-4-6(14)7(15)8(18-4)12-2-1-5(11-17)10-9(12)16/h1-2,4,6-8,13-15,17H,3H2,(H,10,11,16)/t4-,6-,7-,8-/m1/s1
InChIKey InChI 1.06 XCUAIINAJCDIPM-XVFCMESISA-N
SMILES_CANONICAL CACTVS 3.385 OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=NC2=O)NO
SMILES CACTVS 3.385 OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=NC2=O)NO
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C1=CN(C(=O)N=C1NO)[C@H]2[C@@H]([C@@H]([C@H](O2)CO)O)O
SMILES OpenEye OEToolkits 2.0.7 C1=CN(C(=O)N=C1NO)C2C(C(C(O2)CO)O)O
Chemical Database Mapping
Database Reference ID
DrugBank DB15660
ChEMBL CHEMBL2178720
PubChem 197020
ChEBI 180654
SureChEMBL SCHEMBL24780346,SCHEMBL5190819