Structural Complex
Chemical ID: PRD_000219
IUPAC Name: GRAMICIDIN S
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC(=O)CNC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc2ccccc2)NC(=O)CNC(=O)CNC(=O)CNC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc2ccccc2)NC(=O)CN1
InChI: InChI=1S/C40H50N10O10/c51-31-19-41-34(54)22-46-38(58)30-14-8-16-50(30)40(60)28(18-26-11-5-2-6-12-26)48-36(56)24-44-32(52)20-42-33(53)21-45-37(57)29-13-7-15-49(29)39(59)27(47-35(55)23-43-31)17-25-9-3-1-4-10-25/h1-6,9-12,27-30H,7-8,13-24H2,(H,41,54)(H,42,53)(H,43,51)(H,44,52)(H,45,57)(H,46,58)(H,47,55)(H,48,56)/t27-,28-,29+,30+/m1/s1
InChI Key: LMUQTMGHDQTKEM-XAZDILKDSA-N
Physiochemical Descriptor:
Formula: C60 H92 N12 O10
Molecular weight: 1141.447
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 10
Rotatable Bonds: 26
Heavy Atoms: 82
Systematic name
Program Version Descriptor
ACDLabs 12.01 cyclo(L-leucyl-D-phenylalanyl-L-prolyl-L-valyl-L-ornithyl-L-leucyl-D-phenylalanyl-L-prolyl-L-valyl-L-ornithyl)
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1N5C(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N3C(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC1Cc2ccccc2)CC(C)C)CCCN)C(C)C)CCC3)Cc4ccccc4)CC(C)C)CCCN)C(C)C)CCC5
InChI InChI 1.03 InChI=1S/C60H92N12O10/c1-35(2)31-43-53(75)67-45(33-39-19-11-9-12-20-39)59(81)71-29-17-25-47(71)55(77)70-50(38(7)8)58(80)64-42(24-16-28-62)52(74)66-44(32-36(3)4)54(76)68-46(34-40-21-13-10-14-22-40)60(82)72-30-18-26-48(72)56(78)69-49(37(5)6)57(79)63-41(23-15-27-61)51(73)65-43/h9-14,19-22,35-38,41-50H,15-18,23-34,61-62H2,1-8H3,(H,63,79)(H,64,80)(H,65,73)(H,66,74)(H,67,75)(H,68,76)(H,69,78)(H,70,77)/t41-,42-,43+,44?,45+,46+,47+,48-,49?,50+/m0/s1
InChIKey InChI 1.03 IUAYMJGZBVDSGL-GNFSPGSISA-N
SMILES_CANONICAL CACTVS 3.370 CC(C)C[C@@H]1NC(=O)[C@H](CCCN)NC(=O)[C@@H](NC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc3ccccc3)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCN)NC(=O)[C@@H](NC(=O)[C@@H]4CCCN4C(=O)[C@@H](Cc5ccccc5)NC1=O)C(C)C)C(C)C
SMILES CACTVS 3.370 CC(C)C[CH]1NC(=O)[CH](CCCN)NC(=O)[CH](NC(=O)[CH]2CCCN2C(=O)[CH](Cc3ccccc3)NC(=O)[CH](CC(C)C)NC(=O)[CH](CCCN)NC(=O)[CH](NC(=O)[CH]4CCCN4C(=O)[CH](Cc5ccccc5)NC1=O)C(C)C)C(C)C
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC(C)C[C@H]1C(=O)N[C@@H](C(=O)N2CCC[C@H]2C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N3CCC[C@H]3C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)CCCN)C(C)C)Cc4ccccc4)CC(C)C)CCCN)C(C)C)Cc5ccccc5
SMILES OpenEye OEToolkits 1.7.6 CC(C)CC1C(=O)NC(C(=O)N2CCCC2C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N3CCCC3C(=O)NC(C(=O)NC(C(=O)N1)CCCN)C(C)C)Cc4ccccc4)CC(C)C)CCCN)C(C)C)Cc5ccccc5