Structural Complex
Chemical ID: YW5
IUPAC Name: 2-[(R)-(1H-benzimidazol-2-yl)(3-fluorophenyl)methyl]-6-[4-(1-methylpiperidin-4-yl)phenyl]-2,3-dihydro-1H-isoindol-1-one
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1c2cc(-c3ccc(C4CCNCC4)cc3)ccc2CN1[C@H](c1ccccc1)c1nc2ccccc2[nH]1
InChI: InChI=1S/C33H30N4O/c38-33-28-20-26(23-12-10-22(11-13-23)24-16-18-34-19-17-24)14-15-27(28)21-37(33)31(25-6-2-1-3-7-25)32-35-29-8-4-5-9-30(29)36-32/h1-15,20,24,31,34H,16-19,21H2,(H,35,36)/t31-/m1/s1
InChI Key: ZYJZJXFAPSIZCR-WJOKGBTCSA-N
Physiochemical Descriptor:
Formula: C34 H31 F N4 O
Molecular weight: 530.635
Hydrogen Bond Acceptor: 3
Hydrogen Bond Donor: 1
Rotatable Bonds: 6
Heavy Atoms: 40
Systematic name
Program Version Descriptor
ACDLabs 12.01 2-[(R)-(1H-benzimidazol-2-yl)(3-fluorophenyl)methyl]-6-[4-(1-methylpiperidin-4-yl)phenyl]-2,3-dihydro-1H-isoindol-1-one
OpenEye OEToolkits 2.0.7 2-[(~{R})-1~{H}-benzimidazol-2-yl-(3-fluorophenyl)methyl]-6-[4-(1-methylpiperidin-4-yl)phenyl]-3~{H}-isoindol-1-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 CN1CCC(CC1)c1ccc(cc1)c1ccc2CN(C(c3cccc(F)c3)c3nc4ccccc4[NH]3)C(=O)c2c1
InChI InChI 1.06 InChI=1S/C34H31FN4O/c1-38-17-15-24(16-18-38)22-9-11-23(12-10-22)25-13-14-27-21-39(34(40)29(27)20-25)32(26-5-4-6-28(35)19-26)33-36-30-7-2-3-8-31(30)37-33/h2-14,19-20,24,32H,15-18,21H2,1H3,(H,36,37)/t32-/m1/s1
InChIKey InChI 1.06 ZMKPSKAUYOLPIA-JGCGQSQUSA-N
SMILES_CANONICAL CACTVS 3.385 CN1CCC(CC1)c2ccc(cc2)c3ccc4CN([C@H](c5cccc(F)c5)c6[nH]c7ccccc7n6)C(=O)c4c3
SMILES CACTVS 3.385 CN1CCC(CC1)c2ccc(cc2)c3ccc4CN([CH](c5cccc(F)c5)c6[nH]c7ccccc7n6)C(=O)c4c3
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 CN1CCC(CC1)c2ccc(cc2)c3ccc4c(c3)C(=O)N(C4)[C@H](c5cccc(c5)F)c6[nH]c7ccccc7n6
SMILES OpenEye OEToolkits 2.0.7 CN1CCC(CC1)c2ccc(cc2)c3ccc4c(c3)C(=O)N(C4)C(c5cccc(c5)F)c6[nH]c7ccccc7n6