Structural Complex
Chemical ID: YHF
IUPAC Name: 5'-O-[(S)-(cyclopentyloxy)(hydroxy)phosphoryl]adenosine
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=[PH](OC[C@@H]1CC[C@H](n2cnc3cncnc32)O1)OC1CCCC1
InChI: InChI=1S/C15H21N4O4P/c20-24(23-11-3-1-2-4-11)21-8-12-5-6-14(22-12)19-10-18-13-7-16-9-17-15(13)19/h7,9-12,14,24H,1-6,8H2/t12-,14+/m0/s1
InChI Key: LBQGPSTZXAEXBB-GXTWGEPZSA-N
Physiochemical Descriptor:
Formula: C15 H22 N5 O7 P
Molecular weight: 415.338
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 4
Rotatable Bonds: 10
Heavy Atoms: 28
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-O-[(S)-(cyclopentyloxy)(hydroxy)phosphoryl]adenosine
OpenEye OEToolkits 2.0.7 [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl cyclopentyl hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(OC1CCCC1)OCC1OC(n2cnc3c(N)ncnc32)C(O)C1O
InChI InChI 1.06 InChI=1S/C15H22N5O7P/c16-13-10-14(18-6-17-13)20(7-19-10)15-12(22)11(21)9(26-15)5-25-28(23,24)27-8-3-1-2-4-8/h6-9,11-12,15,21-22H,1-5H2,(H,23,24)(H2,16,17,18)/t9-,11-,12-,15-/m1/s1
InChIKey InChI 1.06 ILDPDEYZUPQLBS-SDBHATRESA-N
SMILES_CANONICAL CACTVS 3.385 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)OC4CCCC4)[C@@H](O)[C@H]3O
SMILES CACTVS 3.385 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC4CCCC4)[CH](O)[CH]3O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OC4CCCC4)O)O)N
SMILES OpenEye OEToolkits 2.0.7 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC4CCCC4)O)O)N