Structural Complex
Chemical ID: YHZ
IUPAC Name: 1-[(4-aminopyrimidin-5-yl)amino]-2,5-anhydro-1-deoxy-6-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]-D-allitol
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc(NC[C@H]2CCCO2)cn1
InChI: InChI=1S/C9H13N3O/c1-2-9(13-3-1)6-12-8-4-10-7-11-5-8/h4-5,7,9,12H,1-3,6H2/t9-/m1/s1
InChI Key: GSNABUBGQWIKCY-SECBINFHSA-N
Physiochemical Descriptor:
Formula: C11 H21 N4 O12 P3
Molecular weight: 494.225
Hydrogen Bond Acceptor: 16
Hydrogen Bond Donor: 8
Rotatable Bonds: 17
Heavy Atoms: 30
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-[(4-aminopyrimidin-5-yl)amino]-2,5-anhydro-1-deoxy-6-O-[(S)-hydroxy{[(R)-hydroxy(phosphonomethyl)phosphoryl]oxy}phosphoryl]-D-allitol
OpenEye OEToolkits 2.0.7 [[[(2~{R},3~{S},4~{R},5~{S})-5-[[(4-azanylpyrimidin-5-yl)amino]methyl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]methylphosphonic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(O)CP(=O)(O)OP(=O)(O)OCC1OC(CNc2cncnc2N)C(O)C1O
InChI InChI 1.06 InChI=1S/C11H21N4O12P3/c12-11-6(1-13-4-15-11)14-2-7-9(16)10(17)8(26-7)3-25-30(23,24)27-29(21,22)5-28(18,19)20/h1,4,7-10,14,16-17H,2-3,5H2,(H,21,22)(H,23,24)(H2,12,13,15)(H2,18,19,20)/t7-,8+,9-,10+/m0/s1
InChIKey InChI 1.06 KVTJTUTWTFKEKT-QCLAVDOMSA-N
SMILES_CANONICAL CACTVS 3.385 Nc1ncncc1NC[C@@H]2O[C@H](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)[C@@H](O)[C@H]2O
SMILES CACTVS 3.385 Nc1ncncc1NC[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]2O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1c(c(ncn1)N)NC[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O)O
SMILES OpenEye OEToolkits 2.0.7 c1c(c(ncn1)N)NCC2C(C(C(O2)COP(=O)(O)OP(=O)(CP(=O)(O)O)O)O)O
Chemical Database Mapping
Database Reference ID
PubChem 168451749