Structural Complex
Chemical ID: XF6
IUPAC Name: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(4aS)-7,8-dimethyl-5-(3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}propanoyl)-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1N=C2[C@@H](C(=O)N1)N(C(=O)CCc1ccc(C(=O)Nc3nncs3)cc1)c1ccccc1N2CCCCCO[PH](=O)O[PH](=O)OC[C@@H]1CC[C@H](n2cnc3cncnc32)O1
InChI: InChI=1S/C37H39N11O10P2S/c49-29(14-10-23-8-11-24(12-9-23)34(50)44-37-45-41-22-61-37)48-28-7-3-2-6-27(28)46(33-31(48)35(51)43-36(52)42-33)16-4-1-5-17-55-59(53)58-60(54)56-19-25-13-15-30(57-25)47-21-40-26-18-38-20-39-32(26)47/h2-3,6-9,11-12,18,20-22,25,30-31,59-60H,1,4-5,10,13-17,19H2,(H,43,51,52)(H,44,45,50)/t25-,30+,31-/m0/s1
InChI Key: BKCYXPINSLVGKQ-RVQNBHMFSA-N
Physiochemical Descriptor:
Formula: C40 H46 N12 O17 P2 S
Molecular weight: 1060.876
Hydrogen Bond Acceptor: 26
Hydrogen Bond Donor: 10
Rotatable Bonds: 29
Heavy Atoms: 72
Systematic name
Program Version Descriptor
ACDLabs 12.01 [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(4aS)-7,8-dimethyl-5-(3-{4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl}propanoyl)-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S})-5-[7,8-dimethyl-5-[3-[4-[(5-methyl-1,3,4-thiadiazol-2-yl)carbamoyl]phenyl]propanoyl]-2,4-bis(oxidanylidene)-4~{a}~{H}-benzo[g]pteridin-10-yl]-2,3,4-tris(oxidanyl)pentyl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 Cc1nnc(NC(=O)c2ccc(CCC(=O)N3c4cc(C)c(C)cc4N(CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC4OC(n5cnc6c(N)ncnc65)C(O)C4O)C4=NC(=O)NC(=O)C43)cc2)s1
InChI InChI 1.06 InChI=1S/C40H46N12O17P2S/c1-17-10-22-23(11-18(17)2)52(27(55)9-6-20-4-7-21(8-5-20)36(59)47-40-49-48-19(3)72-40)29-35(45-39(61)46-37(29)60)50(22)12-24(53)30(56)25(54)13-66-70(62,63)69-71(64,65)67-14-26-31(57)32(58)38(68-26)51-16-44-28-33(41)42-15-43-34(28)51/h4-5,7-8,10-11,15-16,24-26,29-32,38,53-54,56-58H,6,9,12-14H2,1-3H3,(H,62,63)(H,64,65)(H2,41,42,43)(H,46,60,61)(H,47,49,59)/t24-,25+,26+,29?,30-,31+,32+,38+/m0/s1
InChIKey InChI 1.06 OBHYXXHEJBSBHN-OHMHGEJISA-N
SMILES_CANONICAL CACTVS 3.385 Cc1sc(NC(=O)c2ccc(CCC(=O)N3[C@@H]4C(=O)NC(=O)N=C4N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]5O[C@H]([C@H](O)[C@@H]5O)n6cnc7c(N)ncnc67)c8cc(C)c(C)cc38)cc2)nn1
SMILES CACTVS 3.385 Cc1sc(NC(=O)c2ccc(CCC(=O)N3[CH]4C(=O)NC(=O)N=C4N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]5O[CH]([CH](O)[CH]5O)n6cnc7c(N)ncnc67)c8cc(C)c(C)cc38)cc2)nn1
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 Cc1cc2c(cc1C)N(C3C(=O)NC(=O)N=C3N2C[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O)C(=O)CCc7ccc(cc7)C(=O)Nc8nnc(s8)C
SMILES OpenEye OEToolkits 2.0.7 Cc1cc2c(cc1C)N(C3C(=O)NC(=O)N=C3N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O)C(=O)CCc7ccc(cc7)C(=O)Nc8nnc(s8)C