Structural Complex
Chemical ID: GJF
IUPAC Name: (1~{R},3~{S},6~{R},8~{R},9~{R},10~{S},12~{S},15~{R},17~{R},18~{R})-8,17-bis(6-aminopurin-9-yl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecane-9,18-diol
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=[PH]1OC[C@@H]2C[C@@H](O[PH](=O)OC[C@H]3O[C@@H](n4cnc5cncnc54)C[C@@H]3O1)[C@H](n1cnc3cncnc31)O2
InChI: InChI=1S/C20H22N8O8P2/c29-37-31-5-11-1-15(20(33-11)28-10-26-13-4-22-8-24-19(13)28)36-38(30)32-6-16-14(35-37)2-17(34-16)27-9-25-12-3-21-7-23-18(12)27/h3-4,7-11,14-17,20,37-38H,1-2,5-6H2/t11-,14-,15+,16+,17+,20+/m0/s1
InChI Key: YPRZLGJRTPPRID-XYHSIYLISA-N
Physiochemical Descriptor:
Formula: C20 H24 N10 O10 P2 S2
Molecular weight: 690.543
Hydrogen Bond Acceptor: 22
Hydrogen Bond Donor: 6
Rotatable Bonds: 8
Heavy Atoms: 44
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 (1~{R},3~{S},6~{R},8~{R},9~{R},10~{S},12~{S},15~{R},17~{R},18~{R})-8,17-bis(6-aminopurin-9-yl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecane-9,18-diol
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.03 InChI=1S/C20H24N10O10P2S2/c21-15-9-17(25-3-23-15)29(5-27-9)19-12(32)13-8(38-19)2-36-42(34,44)40-14-11(31)7(1-35-41(33,43)39-13)37-20(14)30-6-28-10-16(22)24-4-26-18(10)30/h3-8,11-14,19-20,31-32H,1-2H2,(H,33,43)(H,34,44)(H2,21,23,25)(H2,22,24,26)/t7-,8-,11-,12-,13-,14-,19-,20-,41+,42+/m1/s1
InChIKey InChI 1.03 IZJJFUQKKZFVLH-ZPTFDBAZSA-N
SMILES_CANONICAL CACTVS 3.385 Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@@](S)(=O)O[C@@H]5[C@H](O)[C@@H](CO[P@@](S)(=O)O[C@H]4[C@H]3O)O[C@H]5n6cnc7c(N)ncnc67
SMILES CACTVS 3.385 Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](S)(=O)O[CH]5[CH](O)[CH](CO[P](S)(=O)O[CH]4[CH]3O)O[CH]5n6cnc7c(N)ncnc67
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@@](=O)(O[C@@H]5[C@@H]([C@@H](CO[P@@](=O)(O4)S)O[C@H]5n6cnc7c6ncnc7N)O)S)O)N
SMILES OpenEye OEToolkits 2.0.7 c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(C(COP(=O)(O4)S)OC5n6cnc7c6ncnc7N)O)S)O)N