Structural Complex
Chemical ID: KXD
IUPAC Name: 2-azanyl-9-[(1~{R},6~{R},8~{R},9~{R},10~{S},15~{R},17~{R},18~{R})-8-[4-azanyl-5-[4-(naphthalen-1-yloxymethyl)phenyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-3~{H}-purin-6-one
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1nc[nH]c2c1ncn2[C@@H]1O[C@@H]2CO[PH](=O)O[C@H]3C[C@H](n4cc(-c5ccc(COc6cccc7ccccc67)cc5)c5cncnc54)O[C@@H]3CO[PH](=O)O[C@@H]1C2
InChI: InChI=1S/C38H35N7O10P2/c46-37-34-36(41-20-42-37)45(21-43-34)38-31-12-25(52-38)17-50-56(47)54-30-13-33(53-32(30)18-51-57(48)55-31)44-15-28(27-14-39-19-40-35(27)44)24-10-8-22(9-11-24)16-49-29-7-3-5-23-4-1-2-6-26(23)29/h1-11,14-15,19-21,25,30-33,38,56-57H,12-13,16-18H2,(H,41,42,46)/t25-,30-,31+,32+,33+,38+/m0/s1
InChI Key: QSNKNZNNDYTABZ-JTXCWMEZSA-N
Physiochemical Descriptor:
Formula: C38 H37 N9 O14 P2
Molecular weight: 905.700
Hydrogen Bond Acceptor: 22
Hydrogen Bond Donor: 7
Rotatable Bonds: 12
Heavy Atoms: 63
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 2-azanyl-9-[(1~{R},6~{R},8~{R},9~{R},10~{S},15~{R},17~{R},18~{R})-8-[4-azanyl-5-[4-(naphthalen-1-yloxymethyl)phenyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,9,12,18-tetrakis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-3~{H}-purin-6-one
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C38H37N9O14P2/c39-32-26-22(20-10-8-18(9-11-20)13-55-23-7-3-5-19-4-1-2-6-21(19)23)12-46(33(26)42-16-41-32)36-29(49)30-25(59-36)15-57-63(53,54)61-31-28(48)24(14-56-62(51,52)60-30)58-37(31)47-17-43-27-34(47)44-38(40)45-35(27)50/h1-12,16-17,24-25,28-31,36-37,48-49H,13-15H2,(H,51,52)(H,53,54)(H2,39,41,42)(H3,40,44,45,50)/t24-,25-,28-,29-,30-,31-,36-,37-/m1/s1
InChIKey InChI 1.06 DBFLURMMWIAUJW-DANBCEJISA-N
SMILES_CANONICAL CACTVS 3.385 NC1=NC(=O)c2ncn([C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@@H]3[C@@H]4O)n6cc(c7ccc(COc8cccc9ccccc89)cc7)c%10c(N)ncnc6%10)c2N1
SMILES CACTVS 3.385 NC1=NC(=O)c2ncn([CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]3[CH]4O)n6cc(c7ccc(COc8cccc9ccccc89)cc7)c%10c(N)ncnc6%10)c2N1
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1ccc2c(c1)cccc2OCc3ccc(cc3)c4cn(c5c4c(ncn5)N)[C@H]6[C@@H]([C@H]7[C@H](O6)COP(=O)(O[C@@H]8[C@@H]([C@@H](COP(=O)(O7)O)O[C@H]8n9cnc1c9NC(=NC1=O)N)O)O)O
SMILES OpenEye OEToolkits 2.0.7 c1ccc2c(c1)cccc2OCc3ccc(cc3)c4cn(c5c4c(ncn5)N)C6C(C7C(O6)COP(=O)(OC8C(C(COP(=O)(O7)O)OC8n9cnc1c9NC(=NC1=O)N)O)O)O
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL5172826
PubChem 165368570