Structural Complex
Chemical ID: BER
IUPAC Name: BERBERINE
Formal Charge: 1
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2c[n+]3c(cc2c1)-c1cc2c(cc1CC3)OCO2
InChI: InChI=1S/C18H14NO2/c1-2-4-14-10-19-6-5-13-8-17-18(21-11-20-17)9-15(13)16(19)7-12(14)3-1/h1-4,7-10H,5-6,11H2/q+1
InChI Key: QFXXWZCOIVFPGL-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C20 H18 N O4
Molecular weight: 336.361
Hydrogen Bond Acceptor: 4
Hydrogen Bond Donor: 0
Rotatable Bonds: 4
Heavy Atoms: 25
Systematic name
Program Version Descriptor
ACDLabs 10.04 9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O1c2c(OC1)cc5c(c2)c4cc3ccc(OC)c(OC)c3c[n+]4CC5
SMILES_CANONICAL CACTVS 3.341 COc1ccc2cc3c4cc5OCOc5cc4CC[n+]3cc2c1OC
SMILES CACTVS 3.341 COc1ccc2cc3c4cc5OCOc5cc4CC[n+]3cc2c1OC
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 COc1ccc2cc-3[n+](cc2c1OC)CCc4c3cc5c(c4)OCO5
SMILES OpenEye OEToolkits 1.5.0 COc1ccc2cc-3[n+](cc2c1OC)CCc4c3cc5c(c4)OCO5
InChI InChI 1.03 InChI=1S/C20H18NO4/c1-22-17-4-3-12-7-16-14-9-19-18(24-11-25-19)8-13(14)5-6-21(16)10-15(12)20(17)23-2/h3-4,7-10H,5-6,11H2,1-2H3/q+1
InChIKey InChI 1.03 YBHILYKTIRIUTE-UHFFFAOYSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB04115
ChEMBL CHEMBL295124
PubChem 2353
ChEBI 16118
ZINC ZINC000003779067
SureChEMBL SCHEMBL25632
HMDB HMDB0003409