Structural Complex
Chemical ID: PRD_002492
IUPAC Name: Sa-D3
Formal Charge:
Type: peptide-like
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C1CNC(=O)CNC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@@H]2CCCN2C(=O)CNC(=O)CNC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)CNC(=O)CNC(=O)CNC(=O)CNC(=O)[C@@H](Cc2ccccc2)NC(=O)CSCCN1
InChI: InChI=1S/C67H77N17O14S/c85-54-30-72-57(88)34-78-65(96)51(25-41-28-70-47-17-8-5-14-44(41)47)83-67(98)53-19-10-21-84(53)62(93)37-76-59(90)35-79-64(95)50(24-40-27-69-46-16-7-4-13-43(40)46)82-66(97)52(26-42-29-71-48-18-9-6-15-45(42)48)80-60(91)36-75-56(87)32-73-55(86)31-74-58(89)33-77-63(94)49(23-39-11-2-1-3-12-39)81-61(92)38-99-22-20-68-54/h1-9,11-18,27-29,49-53,69-71H,10,19-26,30-38H2,(H,68,85)(H,72,88)(H,73,86)(H,74,89)(H,75,87)(H,76,90)(H,77,94)(H,78,96)(H,79,95)(H,80,91)(H,81,92)(H,82,97)(H,83,98)/t49-,50+,51+,52+,53+/m1/s1
InChI Key: RUQTZEISHKZEGJ-BVJDBQPRSA-N
Physiochemical Descriptor:
Formula: C87 H110 N18 O24 S
Molecular weight: 1823.975
Hydrogen Bond Acceptor: 25
Hydrogen Bond Donor: 22
Rotatable Bonds: 31
Heavy Atoms: 130
Systematic name
Program Version Descriptor
ACDLabs 12.01 (3R,6R,9S,12R,18S,21R,24S,27S,30R,33S,36R,39R,42R,44R,47aS)-21-(3-amino-3-oxopropyl)-6-(2-carboxyethyl)-9-(carboxymethyl)-27-[(1R)-1-hydroxyethyl]-42-(hydroxymethyl)-18-[(4-hydroxyphenyl)methyl]-3,33,36-tris[(1H-indol-3-yl)methyl]-39,41-dimethyl-1,4,7,10,16,19,22,25,28,31,34,37,40,43-tetradecaoxo-24,30-di(propan-2-yl)tetratetracontahydro-1H,15H-pyrrolo[2,1-o][1,4,7,10,13,16,19,22,25,28,31,34,37,40,43]thiatetradecaazacyclopentatetracontine-12-carboxylic acid
OpenEye OEToolkits 2.0.7 (3~{S},6~{S},9~{S},12~{S},15~{S},18~{S},21~{S},24~{S},27~{R},33~{R},36~{S},39~{S},42~{S},45~{S})-24-(3-azanyl-3-oxidanylidene-propyl)-3-(hydroxymethyl)-36-(2-hydroxy-2-oxoethyl)-39-(3-hydroxy-3-oxopropyl)-27-[(4-hydroxyphenyl)methyl]-9,12,42-tris(1~{H}-indol-3-ylmethyl)-4,6-dimethyl-18-[(1~{R})-1-oxidanylethyl]-2,5,8,11,14,17,20,23,26,29,35,38,41,44-tetradecakis(oxidanylidene)-15,21-di(propan-2-yl)-31-thia-1,4,7,10,13,16,19,22,25,28,34,37,40,43-tetradecazabicyclo[43.3.0]octatetracontane-33-carboxylic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1NC(Cc2c[NH]c3ccccc32)C(=O)NC(Cc2c[NH]c3ccccc32)C(=O)NC(C)C(=O)N(C)C(CO)C(=O)N2CCCC2C(=O)NC(Cc2c[NH]c3ccccc32)C(=O)NC(CCC(O)=O)C(=O)NC(CC(O)=O)C(=O)NC(CSCC(=O)NC(Cc2ccc(O)cc2)C(=O)NC(CCC(=O)N)C(=O)NC(C(C)C)C(=O)NC(C(O)C)C(=O)NC1C(C)C)C(O)=O
InChI InChI 1.06 InChI=1S/C87H110N18O24S/c1-42(2)71-82(123)99-62(34-49-38-91-56-20-13-10-17-53(49)56)79(120)96-60(32-47-36-89-54-18-11-8-15-51(47)54)76(117)92-44(5)85(126)104(7)66(39-106)86(127)105-30-14-21-65(105)81(122)98-61(33-48-37-90-55-19-12-9-16-52(48)55)78(119)95-58(27-29-69(111)112)74(115)97-63(35-70(113)114)80(121)100-64(87(128)129)40-130-41-68(110)93-59(31-46-22-24-50(108)25-23-46)77(118)94-57(26-28-67(88)109)75(116)101-72(43(3)4)83(124)103-73(45(6)107)84(125)102-71/h8-13,15-20,22-25,36-38,42-45,57-66,71-73,89-91,106-108H,14,21,26-35,39-41H2,1-7H3,(H2,88,109)(H,92,117)(H,93,110)(H,94,118)(H,95,119)(H,96,120)(H,97,115)(H,98,122)(H,99,123)(H,100,121)(H,101,116)(H,102,125)(H,103,124)(H,111,112)(H,113,114)(H,128,129)/t44-,45+,57-,58-,59+,60-,61-,62-,63-,64-,65-,66-,71-,72-,73-/m0/s1
InChIKey InChI 1.06 YFCHDVBNYPHPMH-WNZMPMRPSA-N
SMILES_CANONICAL CACTVS 3.385 CC(C)[C@@H]1NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)CSC[C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](Cc3c[nH]c4ccccc34)NC(=O)[C@@H]5CCCN5C(=O)[C@H](CO)N(C)C(=O)[C@H](C)NC(=O)[C@H](Cc6c[nH]c7ccccc67)NC(=O)[C@H](Cc8c[nH]c9ccccc89)NC(=O)[C@@H](NC(=O)[C@@H](NC1=O)[C@@H](C)O)C(C)C)C(O)=O
SMILES CACTVS 3.385 CC(C)[CH]1NC(=O)[CH](CCC(N)=O)NC(=O)[CH](Cc2ccc(O)cc2)NC(=O)CSC[CH](NC(=O)[CH](CC(O)=O)NC(=O)[CH](CCC(O)=O)NC(=O)[CH](Cc3c[nH]c4ccccc34)NC(=O)[CH]5CCCN5C(=O)[CH](CO)N(C)C(=O)[CH](C)NC(=O)[CH](Cc6c[nH]c7ccccc67)NC(=O)[CH](Cc8c[nH]c9ccccc89)NC(=O)[CH](NC(=O)[CH](NC1=O)[CH](C)O)C(C)C)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 C[C@H]1C(=O)N([C@H](C(=O)N2CCC[C@H]2C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](CSCC(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)Cc3c[nH]c4c3cccc4)Cc5c[nH]c6c5cccc6)C(C)C)[C@@H](C)O)C(C)C)CCC(=O)N)Cc7ccc(cc7)O)C(=O)O)CC(=O)O)CCC(=O)O)Cc8c[nH]c9c8cccc9)CO)C
SMILES OpenEye OEToolkits 2.0.7 CC1C(=O)N(C(C(=O)N2CCCC2C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(CSCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1)Cc3c[nH]c4c3cccc4)Cc5c[nH]c6c5cccc6)C(C)C)C(C)O)C(C)C)CCC(=O)N)Cc7ccc(cc7)O)C(=O)O)CC(=O)O)CCC(=O)O)Cc8c[nH]c9c8cccc9)CO)C