Structural Complex
Chemical ID: 8I8
IUPAC Name: [[(2~{R},3~{S})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[(3~{S})-3-[2-[(1~{S})-1-[[(1~{S},2~{R},3~{R},4~{S},5~{R})-5-azanyl-3-[(4~{S},5~{R})-4-[(2~{S},3~{R},4~{R},5~{S},6~{E})-3-azanyl-6-(azanylmethylidene)-4,5-bis(oxidanyl)oxan-2-yl]oxy-5-(hydroxymethyl)-3-oxidanyl-oxolan-2-yl]oxy-2-[(2~{S},3~{R},4~{R},5~{S})-3-azanyl-6-(iminomethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-4-oxidanyl-cyclohexyl]amino]-1-oxidanyl-ethyl]sulfanylethylamino]-3-oxidanyl-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate
Formal Charge: 0
Type: non-polymer
Substructure
Substruture Type: MurckoScaffold
SMILES: C=C1CCC[C@@H](O[C@@H]2CO[C@@H](O[C@@H]3CCC[C@H](NCSCCNCCCNC(=O)CCCO[PH](=O)O[PH](=O)OC[C@@H]4CC[C@H](n5cnc6cncnc65)O4)[C@H]3O[C@@H]3CCCCO3)C2)O1
InChI: InChI=1S/C41H67N7O13P2S/c1-29-8-4-13-38(56-29)58-31-22-39(53-24-31)59-34-10-5-9-32(40(34)60-37-12-2-3-19-52-37)47-28-64-21-18-42-16-7-17-44-35(49)11-6-20-54-62(50)61-63(51)55-25-30-14-15-36(57-30)48-27-46-33-23-43-26-45-41(33)48/h23,26-27,30-32,34,36-40,42,47,62-63H,1-22,24-25,28H2,(H,44,49)/t30-,31-,32-,34+,36+,37+,38+,39-,40+/m0/s1
InChI Key: QSJQDKWDCVITOO-NCHKXWEUSA-N
Physiochemical Descriptor:
Formula: C46 H82 N13 O30 P3 S
Molecular weight: 1422.199
Hydrogen Bond Acceptor: 43
Hydrogen Bond Donor: 24
Rotatable Bonds: 54
Heavy Atoms: 93
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.7 [[(2~{R},3~{S})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3~{R})-4-[[(3~{S})-3-[2-[(1~{S})-1-[[(1~{S},2~{R},3~{R},4~{S},5~{R})-5-azanyl-3-[(4~{S},5~{R})-4-[(2~{S},3~{R},4~{R},5~{S},6~{E})-3-azanyl-6-(azanylmethylidene)-4,5-bis(oxidanyl)oxan-2-yl]oxy-5-(hydroxymethyl)-3-oxidanyl-oxolan-2-yl]oxy-2-[(2~{S},3~{R},4~{R},5~{S})-3-azanyl-6-(iminomethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-4-oxidanyl-cyclohexyl]amino]-1-oxidanyl-ethyl]sulfanylethylamino]-3-oxidanyl-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.06 InChI=1S/C46H82N13O30P3S/c1-45(2,13-80-92(77,78)89-91(75,76)79-12-21-35(88-90(72,73)74)31(67)41(81-21)59-15-57-25-38(52)55-14-56-39(25)59)37(69)40(70)54-5-4-22(61)53-6-7-93-46(3,71)58-17-8-16(49)26(62)36(33(17)85-42-23(50)29(65)27(63)18(9-47)82-42)87-44-32(68)34(20(11-60)84-44)86-43-24(51)30(66)28(64)19(10-48)83-43/h9-10,14-18,20-24,26-37,41-44,47,53,58,60-69,71H,4-8,11-13,48-51H2,1-3H3,(H,54,70)(H,75,76)(H,77,78)(H2,52,55,56)(H2,72,73,74)/b19-10+,47-9+/t16-,17+,18-,20-,21-,22+,23-,24-,26+,27-,28-,29-,30-,31-,32-,33-,34-,35-,36-,37+,41-,42-,43-,44+,46+/m1/s1
InChIKey InChI 1.06 KNUGXPWVQDBKDV-VYRIPBRXSA-N
SMILES_CANONICAL CACTVS 3.385 CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCC[C@H](O)NCCS[C@](C)(O)N[C@H]4C[C@@H](N)[C@H](O)[C@@H](O[C@@H]5O[C@H](CO)[C@@H](O[C@H]6OC(=C/N)/[C@@H](O)[C@H](O)[C@H]6N)[C@H]5O)[C@@H]4O[C@H]7O[C@H](C=N)[C@@H](O)[C@H](O)[C@H]7N
SMILES CACTVS 3.385 CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCC[CH](O)NCCS[C](C)(O)N[CH]4C[CH](N)[CH](O)[CH](O[CH]5O[CH](CO)[CH](O[CH]6OC(=CN)[CH](O)[CH](O)[CH]6N)[CH]5O)[CH]4O[CH]7O[CH](C=N)[CH](O)[CH](O)[CH]7N
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 [H]/N=C/C1[C@H]([C@@H]([C@H]([C@H](O1)O[C@@H]2[C@H](C[C@H]([C@@H]([C@H]2OC3C([C@@H]([C@H](O3)CO)O[C@@H]4[C@@H]([C@H]([C@@H](/C(=C\N)/O4)O)O)N)O)O)N)N[C@@](C)(O)SCCN[C@H](CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]5[C@H](C(C(O5)n6cnc7c6ncnc7N)O)OP(=O)(O)O)O)O)N)O)O
SMILES OpenEye OEToolkits 2.0.7 CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(NCCSC(C)(NC4CC(C(C(C4OC5C(C(C(C(O5)C=N)O)O)N)OC6C(C(C(O6)CO)OC7C(C(C(C(=CN)O7)O)O)N)O)O)N)O)O)O