Structural Complex
Chemical ID: OMG
IUPAC Name: O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1[nH]cnc2c1ncn2[C@H]1CCCO1
InChI: InChI=1S/C9H10N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4-6H,1-3H2,(H,10,11,14)/t6-/m1/s1
InChI Key: JBXHFRZBULGPSC-ZCFIWIBFSA-N
Physiochemical Descriptor:
Formula: C11 H16 N5 O8 P
Molecular weight: 377.247
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 5
Rotatable Bonds: 10
Heavy Atoms: 25
Systematic name
Program Version Descriptor
ACDLabs 10.04 2'-O-methylguanosine 5'-(dihydrogen phosphate)
OpenEye OEToolkits 1.5.0 [(2R,3R,4R,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxy-4-methoxy-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3OC)COP(=O)(O)O
SMILES_CANONICAL CACTVS 3.341 CO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3C(=O)NC(=Nc23)N
SMILES CACTVS 3.341 CO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3C(=O)NC(=Nc23)N
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O
SMILES OpenEye OEToolkits 1.5.0 COC1C(C(OC1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O
InChI InChI 1.03 InChI=1S/C11H16N5O8P/c1-22-7-6(17)4(2-23-25(19,20)21)24-10(7)16-3-13-5-8(16)14-11(12)15-9(5)18/h3-4,6-7,10,17H,2H2,1H3,(H2,19,20,21)(H3,12,14,15,18)/t4-,6-,7-,10-/m1/s1
InChIKey InChI 1.03 YPMKZCOIEXUDSS-KQYNXXCUSA-N
Chemical Database Mapping
Database Reference ID
PubChem 135616719
ChEBI 44638
SureChEMBL SCHEMBL600378