Structural Complex
Chemical ID: KDM
IUPAC Name: deamino-alpha-neuraminic acid
Formal Charge: 0
Type: D-saccharide, alpha linking
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CCOCC1
InChI: InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key: DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C9 H16 O9
Molecular weight: 268.218
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 7
Rotatable Bonds: 10
Heavy Atoms: 18
Systematic name
Program Version Descriptor
OpenEye OEToolkits 1.6.1 (2R,4S,5R,6R)-2,4,5-trihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid
GMML 1.0 DKdnpa
GMML 1.0 2-keto-3-deoxy-a-D-nonulopyranosic acid
PDB-CARE 1.0 a-D-Kdnp
GMML 1.0 Kdn
Chemical Descriptors
Type Program Version Descriptor
SMILES_CANONICAL CACTVS 3.352 OC[C@@H](O)[C@@H](O)[C@@H]1O[C@](O)(C[C@H](O)[C@H]1O)C(O)=O
SMILES CACTVS 3.352 OC[CH](O)[CH](O)[CH]1O[C](O)(C[CH](O)[CH]1O)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.6.1 C1[C@@H]([C@H]([C@@H](O[C@]1(C(=O)O)O)[C@@H]([C@@H](CO)O)O)O)O
SMILES OpenEye OEToolkits 1.6.1 C1C(C(C(OC1(C(=O)O)O)C(C(CO)O)O)O)O
InChI InChI 1.03 InChI=1S/C9H16O9/c10-2-4(12)6(14)7-5(13)3(11)1-9(17,18-7)8(15)16/h3-7,10-14,17H,1-2H2,(H,15,16)/t3-,4+,5+,6+,7+,9+/m0/s1
InChIKey InChI 1.03 CLRLHXKNIYJWAW-LSRLBZCKSA-N
Chemical Database Mapping
Database Reference ID
PubChem 197508
ChEBI 71432
ZINC ZINC000004521632