ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: LKC

IUPAC Name: 4-AMINO-1-[(1S,3R,4R,7S)-7-HYDROXY-1-(HYDROXYMETHYL)-2,5-DIOXABICYCLO[2.2.1]HEPT-3-YL]-5-METHYLPYRIMIDIN-2(1H)-ONE

Formal Charge: 0

Type: RNA LINKING

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ncccn1[C@@H]1OC2CO[C@@H]1C2

InChI: InChI=1S/C9H10N2O3/c12-9-10-2-1-3-11(9)8-7-4-6(14-8)5-13-7/h1-3,6-8H,4-5H2/t6?,7-,8-/m1/s1

InChI Key: FNCZWLRKNYRWCJ-SPDVFEMOSA-N

Physiochemical Descriptor:

Formula: C11 H15 N3 O5

Molecular weight: 269.254

Hydrogen Bond Acceptor: 8

Hydrogen Bond Donor: 3

Rotatable Bonds: 6

Heavy Atoms: 19

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	4-amino-1-[2,5-anhydro-4-(hydroxymethyl)-alpha-L-lyxofuranosyl]-5-methylpyrimidin-2(1H)-one
OpenEye OEToolkits	1.5.0	4-amino-1-[(1R,4S,6R,7S)-7-hydroxy-4-(hydroxymethyl)-2,5-dioxabicyclo[2.2.1]heptan-6-yl]-5-methyl-pyrimidin-2-one

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1N=C(N)C(=CN1C3OC2(C(O)C3OC2)CO)C
SMILES_CANONICAL	CACTVS	3.341	CC1=CN([C@@H]2O[C@@]3(CO)CO[C@@H]2[C@@H]3O)C(=O)N=C1N
SMILES	CACTVS	3.341	CC1=CN([CH]2O[C]3(CO)CO[CH]2[CH]3O)C(=O)N=C1N
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)N=C1N)[C@H]2[C@H]3[C@@H]([C@@](O2)(CO3)CO)O
SMILES	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)N=C1N)C2C3C(C(O2)(CO3)CO)O
InChI	InChI	1.03	InChI=1S/C11H15N3O5/c1-5-2-14(10(17)13-8(5)12)9-6-7(16)11(3-15,19-9)4-18-6/h2,6-7,9,15-16H,3-4H2,1H3,(H2,12,13,17)/t6-,7+,9-,11+/m1/s1
InChIKey	InChI	1.03	NELYIRACPIJATH-SZVQBCOZSA-N

Chemical Database Mapping