Structural Complex
Chemical ID: 51G
IUPAC Name: gentamicin C1
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CC[C@@H](O[C@@H]2CCC[C@H](O[C@@H]3CCCCO3)C2)OC1
InChI: InChI=1S/C16H28O4/c1-3-10-17-15(8-1)19-13-6-5-7-14(12-13)20-16-9-2-4-11-18-16/h13-16H,1-12H2/t13-,14+,15-,16-/m1/s1
InChI Key: UOYDWHSPHHJHEM-QKPAOTATSA-N
Physiochemical Descriptor:
Formula: C21 H43 N5 O7
Molecular weight: 477.595
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 8
Rotatable Bonds: 17
Heavy Atoms: 33
Systematic name
Program Version Descriptor
ACDLabs 12.01 (1S,2S,3R,4S,6R)-4,6-diamino-3-({(2R,3R,6S)-3-amino-6-[(1R)-1-(methylamino)ethyl]tetrahydro-2H-pyran-2-yl}oxy)-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside
OpenEye OEToolkits 1.9.2 (2R,3R,4R,5R)-2-[(1S,2S,3R,4S,6R)-4,6-bis(azanyl)-3-[(2R,3R,6S)-3-azanyl-6-[(1R)-1-(methylamino)ethyl]oxan-2-yl]oxy-2-oxidanyl-cyclohexyl]oxy-5-methyl-4-(methylamino)oxane-3,5-diol
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 OC1C(NC)C(C)(O)COC1OC2C(CC(N)C(C2O)OC3OC(CCC3N)C(NC)C)N
InChI InChI 1.03 InChI=1S/C21H43N5O7/c1-9(25-3)13-6-5-10(22)19(31-13)32-16-11(23)7-12(24)17(14(16)27)33-20-15(28)18(26-4)21(2,29)8-30-20/h9-20,25-29H,5-8,22-24H2,1-4H3/t9-,10-,11+,12-,13+,14+,15-,16-,17+,18-,19-,20-,21+/m1/s1
InChIKey InChI 1.03 CEAZRRDELHUEMR-CAMVTXANSA-N
SMILES_CANONICAL CACTVS 3.385 CN[C@H](C)[C@@H]1CC[C@@H](N)[C@H](O1)O[C@@H]2[C@@H](N)C[C@@H](N)[C@H](O[C@H]3OC[C@](C)(O)[C@H](NC)[C@H]3O)[C@H]2O
SMILES CACTVS 3.385 CN[CH](C)[CH]1CC[CH](N)[CH](O1)O[CH]2[CH](N)C[CH](N)[CH](O[CH]3OC[C](C)(O)[CH](NC)[CH]3O)[CH]2O
SMILES_CANONICAL OpenEye OEToolkits 1.9.2 C[C@H]([C@@H]1CC[C@H]([C@H](O1)O[C@@H]2[C@H](C[C@H]([C@@H]([C@H]2O)O[C@@H]3[C@@H]([C@H]([C@@](CO3)(C)O)NC)O)N)N)N)NC
SMILES OpenEye OEToolkits 1.9.2 CC(C1CCC(C(O1)OC2C(CC(C(C2O)OC3C(C(C(CO3)(C)O)NC)O)N)N)N)NC
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL463809
PubChem 72395
ZINC ZINC000008143541
SureChEMBL SCHEMBL19270300