ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: THP

IUPAC Name: THYMIDINE-3',5'-DIPHOSPHATE

Formal Charge: 0

Type: DNA LINKING

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1ccn([C@H]2CCCO2)c(=O)[nH]1

InChI: InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1

InChI Key: CWWIKVUHBBTKHC-SSDOTTSWSA-N

Physiochemical Descriptor:

Formula: C10 H16 N2 O11 P2

Molecular weight: 402.188

Hydrogen Bond Acceptor: 12

Hydrogen Bond Donor: 5

Rotatable Bonds: 11

Heavy Atoms: 25

Systematic name

Program	Version	Descriptor
ACDLabs	10.04	thymidine 3',5'-bis(dihydrogen phosphate)
OpenEye OEToolkits	1.5.0	[(2R,3S,5R)-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)-3-phosphonooxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1NC(=O)N(C=C1C)C2OC(C(OP(=O)(O)O)C2)COP(=O)(O)O
SMILES_CANONICAL	CACTVS	3.341	CC1=CN([C@H]2C[C@H](O[P](O)(O)=O)[C@@H](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES	CACTVS	3.341	CC1=CN([CH]2C[CH](O[P](O)(O)=O)[CH](CO[P](O)(O)=O)O2)C(=O)NC1=O
SMILES_CANONICAL	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COP(=O)(O)O)OP(=O)(O)O
SMILES	OpenEye OEToolkits	1.5.0	CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)O)OP(=O)(O)O
InChI	InChI	1.03	InChI=1S/C10H16N2O11P2/c1-5-3-12(10(14)11-9(5)13)8-2-6(23-25(18,19)20)7(22-8)4-21-24(15,16)17/h3,6-8H,2,4H2,1H3,(H,11,13,14)(H2,15,16,17)(H2,18,19,20)/t6-,7+,8+/m0/s1
InChIKey	InChI	1.03	CSNCBOPUCJOHLS-XLPZGREQSA-N

Chemical Database Mapping