Structural Complex
Chemical ID: A23
IUPAC Name: ADENOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE
Formal Charge: 0
Type: RNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: O=[PH]1O[C@H]2[C@H](n3cnc4cncnc43)OC[C@H]2O1
InChI: InChI=1S/C9H9N4O4P/c14-18-16-6-2-15-9(7(6)17-18)13-4-12-5-1-10-3-11-8(5)13/h1,3-4,6-7,9,18H,2H2/t6-,7-,9-/m1/s1
InChI Key: VQFAXFHZLZTZLB-ZXFLCMHBSA-N
Physiochemical Descriptor:
Formula: C10 H13 N5 O9 P2
Molecular weight: 409.186
Hydrogen Bond Acceptor: 14
Hydrogen Bond Donor: 4
Rotatable Bonds: 8
Heavy Atoms: 26
Systematic name
Program Version Descriptor
ACDLabs 10.04 [(2S,3aR,4R,6R,6aR)-6-(6-amino-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methyl dihydrogen phosphate
OpenEye OEToolkits 1.5.0 [(1R,3S,5R,6R,8R)-6-(6-aminopurin-9-yl)-3-hydroxy-3-oxo-2,4,7-trioxa-3$l^{5}-phosphabicyclo[3.3.0]octan-8-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=P1(OC2C(OC(C2O1)COP(=O)(O)O)n3c4ncnc(N)c4nc3)O
SMILES_CANONICAL CACTVS 3.341 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@H]4O[P@@](O)(=O)O[C@@H]34
SMILES CACTVS 3.341 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH]4O[P](O)(=O)O[CH]34
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@H]4[C@@H]([C@H](O3)COP(=O)(O)O)O[P@@](=O)(O4)O)N
SMILES OpenEye OEToolkits 1.5.0 c1nc(c2c(n1)n(cn2)C3C4C(C(O3)COP(=O)(O)O)OP(=O)(O4)O)N
InChI InChI 1.03 InChI=1S/C10H13N5O9P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7-6(23-26(19,20)24-7)4(22-10)1-21-25(16,17)18/h2-4,6-7,10H,1H2,(H,19,20)(H2,11,12,13)(H2,16,17,18)/t4-,6-,7-,10-/m1/s1
InChIKey InChI 1.03 HJMBCNJTGVMDOA-KQYNXXCUSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL1230695
PubChem 12876352
ChEBI 40403
ZINC ZINC000013776853