Structural Complex
Chemical ID: 6MA
IUPAC Name: N6-METHYL-DEOXY-ADENOSINE-5'-MONOPHOSPHATE
Formal Charge: 0
Type: DNA LINKING
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc2ncn([C@H]3CCCO3)c2n1
InChI: InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key: DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula: C11 H16 N5 O6 P
Molecular weight: 345.248
Hydrogen Bond Acceptor: 11
Hydrogen Bond Donor: 4
Rotatable Bonds: 9
Heavy Atoms: 23
Systematic name
Program Version Descriptor
ACDLabs 12.01 2'-deoxy-N-methyladenosine 5'-(dihydrogen phosphate)
OpenEye OEToolkits 1.7.0 [(2R,3S,5R)-3-hydroxy-5-[6-(methylamino)purin-9-yl]oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)NC)CC3O
SMILES_CANONICAL CACTVS 3.370 CNc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
SMILES CACTVS 3.370 CNc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
SMILES_CANONICAL OpenEye OEToolkits 1.7.0 CNc1c2c(ncn1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O
SMILES OpenEye OEToolkits 1.7.0 CNc1c2c(ncn1)n(cn2)C3CC(C(O3)COP(=O)(O)O)O
InChI InChI 1.03 InChI=1S/C11H16N5O6P/c1-12-10-9-11(14-4-13-10)16(5-15-9)8-2-6(17)7(22-8)3-21-23(18,19)20/h4-8,17H,2-3H2,1H3,(H,12,13,14)(H2,18,19,20)/t6-,7+,8+/m0/s1
InChIKey InChI 1.03 MGKYNCZAQIZDCV-XLPZGREQSA-N
Chemical Database Mapping
Database Reference ID
PubChem 49866558