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Summary
Structure Feature
Experiment
Ligands & Environment
6PO1
pdb_00006po1
10.2210/pdb6po1/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
Full Validation Report
Validation File (XML)
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FASTA Zipped(.gz)
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Validation File Zipped (.xml.gz)
Validation File Zipped (.cif.gz)
ADP
AGS
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
AGS
IUPAC Name:
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Formal Charge:
0
Type:
NON-POLYMER
Substructure
Substruture Type:
MurckoScaffold
SMILES:
c1ncc2ncn([C@H]3CCCO3)c2n1
InChI:
InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key:
DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula:
C10 H16 N5 O12 P3 S
Molecular weight:
523.247
Hydrogen Bond Acceptor:
18
Hydrogen Bond Donor:
7
Rotatable Bonds:
15
Heavy Atoms:
31
Systematic name
Program
Version
Descriptor
ACDLabs
12.01
5'-O-[(S)-hydroxy{[(S)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]adenosine
OpenEye OEToolkits
1.7.6
[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] bis(oxidanyl)phosphinothioyl hydrogen phosphate
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
12.01
O=P(O)(OP(=S)(O)O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
InChI
InChI
1.03
InChI=1S/C10H16N5O12P3S/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(25-10)1-24-28(18,19)26-29(20,21)27-30(22,23)31/h2-4,6-7,10,16-17H,1H2,(H,18,19)(H,20,21)(H2,11,12,13)(H2,22,23,31)/t4-,6-,7-,10-/m1/s1
InChIKey
InChI
1.03
NLTUCYMLOPLUHL-KQYNXXCUSA-N
SMILES_CANONICAL
CACTVS
3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
SMILES
CACTVS
3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
SMILES_CANONICAL
OpenEye OEToolkits
1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
SMILES
OpenEye OEToolkits
1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB02930
ChEMBL
CHEMBL131890
PubChem
440317
ChEBI
27575
ZINC
ZINC000008295128
SureChEMBL
SCHEMBL20164791
,
SCHEMBL77440
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