Structural Complex
Chemical ID: L6M
IUPAC Name: 5'-{[N-({(1S,2R)-2-[4-(carboxymethyl)benzene-1-carbonyl]cyclopentyl}acetyl)-L-gamma-glutamyl]amino}-2',5'-dideoxycytidine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(CCCNC(=O)C[C@@H]1CCC[C@H]1C(=O)c1ccccc1)NC[C@@H]1CC[C@H](n2cccnc2=O)O1
InChI: InChI=1S/C27H34N4O5/c32-23(30-18-21-12-13-25(36-21)31-16-6-15-29-27(31)35)11-5-14-28-24(33)17-20-9-4-10-22(20)26(34)19-7-2-1-3-8-19/h1-3,6-8,15-16,20-22,25H,4-5,9-14,17-18H2,(H,28,33)(H,30,32)/t20-,21-,22+,25+/m0/s1
InChI Key: UEECQMUGNXRKEG-VRIJDZSUSA-N
Physiochemical Descriptor:
Formula: C30 H37 N5 O10
Molecular weight: 627.642
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 6
Rotatable Bonds: 16
Heavy Atoms: 45
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-{[N-({(1S,2R)-2-[4-(carboxymethyl)benzene-1-carbonyl]cyclopentyl}acetyl)-L-gamma-glutamyl]amino}-2',5'-dideoxycytidine
OpenEye OEToolkits 2.0.7 (2~{S})-5-[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methylamino]-2-[2-[2-[4-(2-hydroxy-2-oxoethyl)phenyl]carbonylcyclopentyl]ethanoylamino]-5-oxidanylidene-pentanoic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 C(CC(C(=O)O)NC(CC2C(C(c1ccc(CC(=O)O)cc1)=O)CCC2)=O)C(NCC4C(CC(N3C=CC(=NC3=O)N)O4)O)=O
InChI InChI 1.03 InChI=1S/C30H37N5O10/c31-23-10-11-35(30(44)34-23)26-14-21(36)22(45-26)15-32-24(37)9-8-20(29(42)43)33-25(38)13-18-2-1-3-19(18)28(41)17-6-4-16(5-7-17)12-27(39)40/h4-7,10-11,18-22,26,36H,1-3,8-9,12-15H2,(H,32,37)(H,33,38)(H,39,40)(H,42,43)(H2,31,34,44)/t18-,19+,20-,21-,22+,26+/m0/s1
InChIKey InChI 1.03 JVRVDICAIPFWFZ-BONAQRLYSA-N
SMILES_CANONICAL CACTVS 3.385 NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CNC(=O)CC[C@H](NC(=O)C[C@@H]3CCC[C@H]3C(=O)c4ccc(CC(O)=O)cc4)C(O)=O)O2
SMILES CACTVS 3.385 NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CNC(=O)CC[CH](NC(=O)C[CH]3CCC[CH]3C(=O)c4ccc(CC(O)=O)cc4)C(O)=O)O2
SMILES_CANONICAL OpenEye OEToolkits 2.0.7 c1cc(ccc1CC(=O)O)C(=O)C2CCCC2CC(=O)N[C@@H](CCC(=O)NC[C@@H]3[C@H](C[C@@H](O3)N4C=CC(=NC4=O)N)O)C(=O)O
SMILES OpenEye OEToolkits 2.0.7 c1cc(ccc1CC(=O)O)C(=O)C2CCCC2CC(=O)NC(CCC(=O)NCC3C(CC(O3)N4C=CC(=NC4=O)N)O)C(=O)O
Chemical Database Mapping
Database Reference ID
PubChem 145915898
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