Structural Complex
Chemical ID: EJ8
IUPAC Name: [(2~{R},4~{a}~{R},6~{R},7~{a}~{R})-6-[2,4-bis(oxidanylidene)-5-(phosphonomethylsulfanylmethyl)pyrimidin-1-yl]-2-phenyl-4~{a},6,7,7~{a}-tetrahydro-4~{H}-furo[3,2-d][1,3]dioxin-2-yl]phosphonic acid
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ccn([C@H]2C[C@H]3OC(c4ccccc4)OC[C@H]3O2)c(=O)[nH]1
InChI: InChI=1S/C16H16N2O5/c19-13-6-7-18(16(20)17-13)14-8-11-12(22-14)9-21-15(23-11)10-4-2-1-3-5-10/h1-7,11-12,14-15H,8-9H2,(H,17,19,20)/t11-,12-,14-,15+/m1/s1
InChI Key: DPMDRGKDJLBCRC-GBOPCIDUSA-N
Physiochemical Descriptor:
Formula: C18 H22 N2 O11 P2 S
Molecular weight: 536.387
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 5
Rotatable Bonds: 11
Heavy Atoms: 34
Systematic name
Program Version Descriptor
OpenEye OEToolkits 2.0.6 [(2~{R},4~{a}~{R},6~{R},7~{a}~{R})-6-[2,4-bis(oxidanylidene)-5-(phosphonomethylsulfanylmethyl)pyrimidin-1-yl]-2-phenyl-4~{a},6,7,7~{a}-tetrahydro-4~{H}-furo[3,2-d][1,3]dioxin-2-yl]phosphonic acid
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.03 InChI=1S/C18H22N2O11P2S/c21-16-11(9-34-10-32(23,24)25)7-20(17(22)19-16)15-6-13-14(30-15)8-29-18(31-13,33(26,27)28)12-4-2-1-3-5-12/h1-5,7,13-15H,6,8-10H2,(H,19,21,22)(H2,23,24,25)(H2,26,27,28)/t13-,14-,15-,18-/m1/s1
InChIKey InChI 1.03 KFRRWRABRKBEOD-ATNYBXOESA-N
SMILES_CANONICAL CACTVS 3.385 O[P](O)(=O)CSCC1=CN([C@H]2C[C@H]3O[C@](OC[C@H]3O2)(c4ccccc4)[P](O)(O)=O)C(=O)NC1=O
SMILES CACTVS 3.385 O[P](O)(=O)CSCC1=CN([CH]2C[CH]3O[C](OC[CH]3O2)(c4ccccc4)[P](O)(O)=O)C(=O)NC1=O
SMILES_CANONICAL OpenEye OEToolkits 2.0.6 c1ccc(cc1)[C@]2(OC[C@@H]3[C@H](O2)C[C@@H](O3)N4C=C(C(=O)NC4=O)CSCP(=O)(O)O)P(=O)(O)O
SMILES OpenEye OEToolkits 2.0.6 c1ccc(cc1)C2(OCC3C(O2)CC(O3)N4C=C(C(=O)NC4=O)CSCP(=O)(O)O)P(=O)(O)O
Chemical Database Mapping
Database Reference ID
PubChem 134686804