Structural Complex
Chemical ID: NGE
IUPAC Name: N-glycolyl-beta-neuraminic acid
Formal Charge: 0
Type: D-saccharide, beta linking
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CCOCC1
InChI: InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key: DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C11 H19 N O10
Molecular weight: 325.269
Hydrogen Bond Acceptor: 10
Hydrogen Bond Donor: 8
Rotatable Bonds: 12
Heavy Atoms: 22
Systematic name
Program Version Descriptor
ACDLabs 10.04 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-beta-D-galacto-non-2-ulopyranosonic acid
OpenEye OEToolkits 1.6.1 (2S,4S,5R,6R)-2,4-dihydroxy-5-(2-hydroxyethanoylamino)-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid
GMML 1.0 DNeup5Gcb
GMML 1.0 N-glycolyl-b-D-neuraminic acid
PDB-CARE 1.0 b-D-Neup5Gc
GMML 1.0 Neu5Gc
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(O)C1(O)OC(C(O)C(O)CO)C(NC(=O)CO)C(O)C1
SMILES_CANONICAL CACTVS 3.352 OC[C@@H](O)[C@@H](O)[C@@H]1O[C@@](O)(C[C@H](O)[C@H]1NC(=O)CO)C(O)=O
SMILES CACTVS 3.352 OC[CH](O)[CH](O)[CH]1O[C](O)(C[CH](O)[CH]1NC(=O)CO)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.6.1 C1[C@@H]([C@H]([C@@H](O[C@@]1(C(=O)O)O)[C@@H]([C@@H](CO)O)O)NC(=O)CO)O
SMILES OpenEye OEToolkits 1.6.1 C1C(C(C(OC1(C(=O)O)O)C(C(CO)O)O)NC(=O)CO)O
InChI InChI 1.03 InChI=1S/C11H19NO10/c13-2-5(16)8(18)9-7(12-6(17)3-14)4(15)1-11(21,22-9)10(19)20/h4-5,7-9,13-16,18,21H,1-3H2,(H,12,17)(H,19,20)/t4-,5+,7+,8+,9+,11-/m0/s1
InChIKey InChI 1.03 FDJKUWYYUZCUJX-AJKRCSPLSA-N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL496421
PubChem 123802
ChEBI 62084
ZINC ZINC000004096097
SureChEMBL SCHEMBL22503
HMDB HMDB0000833