Structural Complex
Chemical ID: 5KQ
IUPAC Name: (6R)-5-acetamido-6-[(1S,2S)-3-acetamido-1,2-dihydroxypropyl]-3,5-dideoxy-beta-L-threo-hex-2-ulopyranosonic acid
Formal Charge: 0
Type: L-saccharide, beta linking
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CCOCC1
InChI: InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key: DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C13 H22 N2 O9
Molecular weight: 350.322
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 7
Rotatable Bonds: 12
Heavy Atoms: 24
Systematic name
Program Version Descriptor
ACDLabs 12.01 (6R)-5-(acetylamino)-6-[(1S,2S)-3-(acetylamino)-1,2-dihydroxypropyl]-3,5-dideoxy-beta-L-threo-hex-2-ulopyranosonic acid
OpenEye OEToolkits 1.9.2 (2R,4S,5R,6R)-5-acetamido-6-[(1S,2S)-3-acetamido-1,2-bis(oxidanyl)propyl]-2,4-bis(oxidanyl)oxane-2-carboxylic acid
PDB-CARE 1.0 a-D-Neup5Ac9NAc
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 CC(=O)NC1C(OC(CC1O)(O)C(O)=O)C(O)C(CNC(=O)C)O
InChI InChI 1.03 InChI=1S/C13H22N2O9/c1-5(16)14-4-8(19)10(20)11-9(15-6(2)17)7(18)3-13(23,24-11)12(21)22/h7-11,18-20,23H,3-4H2,1-2H3,(H,14,16)(H,15,17)(H,21,22)/t7-,8-,9+,10-,11+,13+/m0/s1
InChIKey InChI 1.03 VOVFDZJABRGWTQ-IAGKUOAJSA-N
SMILES_CANONICAL CACTVS 3.385 CC(=O)NC[C@H](O)[C@H](O)[C@@H]1O[C@](O)(C[C@H](O)[C@H]1NC(C)=O)C(O)=O
SMILES CACTVS 3.385 CC(=O)NC[CH](O)[CH](O)[CH]1O[C](O)(C[CH](O)[CH]1NC(C)=O)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.9.2 CC(=O)NC[C@@H]([C@@H]([C@H]1[C@@H]([C@H](C[C@@](O1)(C(=O)O)O)O)NC(=O)C)O)O
SMILES OpenEye OEToolkits 1.9.2 CC(=O)NCC(C(C1C(C(CC(O1)(C(=O)O)O)O)NC(=O)C)O)O
Chemical Database Mapping
Database Reference ID
PubChem 118797276
ZINC ZINC000584904953