Structural Complex
Chemical ID: 5GY
IUPAC Name: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-[(1R)-2-fluoro-1-hydroxyethyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
Formal Charge: 1
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc(C[n+]2ccsc2)cn1
InChI: InChI=1S/C8H8N3S/c1-2-12-7-11(1)5-8-3-9-6-10-4-8/h1-4,6-7H,5H2/q+1
InChI Key: VOZNMBMJVMRVOB-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C14 H22 F N4 O8 P2 S
Molecular weight: 487.357
Hydrogen Bond Acceptor: 12
Hydrogen Bond Donor: 5
Rotatable Bonds: 17
Heavy Atoms: 30
Systematic name
Program Version Descriptor
ACDLabs 12.01 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-[(1R)-2-fluoro-1-hydroxyethyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium
OpenEye OEToolkits 2.0.4 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-[(1~{R})-2-fluoranyl-1-oxidanyl-ethyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 Nc1c(cnc(C)n1)C[n+]2c(c(sc2C(O)CF)CCOP(=O)(O)OP(O)(=O)O)C
InChI InChI 1.03 InChI=1S/C14H21FN4O8P2S/c1-8-12(3-4-26-29(24,25)27-28(21,22)23)30-14(11(20)5-15)19(8)7-10-6-17-9(2)18-13(10)16/h6,11,20H,3-5,7H2,1-2H3,(H4-,16,17,18,21,22,23,24,25)/p+1/t11-/m1/s1
InChIKey InChI 1.03 RCUDZGRKYWDHTO-LLVKDONJSA-O
SMILES_CANONICAL CACTVS 3.385 Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)(O)=O)sc2[C@H](O)CF)c(N)n1
SMILES CACTVS 3.385 Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)(O)=O)sc2[CH](O)CF)c(N)n1
SMILES_CANONICAL OpenEye OEToolkits 2.0.4 Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C@@H](CF)O)CCOP(=O)(O)OP(=O)(O)O
SMILES OpenEye OEToolkits 2.0.4 Cc1c(sc([n+]1Cc2cnc(nc2N)C)C(CF)O)CCOP(=O)(O)OP(=O)(O)O
Chemical Database Mapping
Database Reference ID
PubChem 122164598
ZINC ZINC000584904872