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Summary
Structure Feature
Experiment
Ligands & Environment
5CIY
pdb_00005ciy
10.2210/pdb5ciy/pdb
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FASTA
PDB
MMCIF
Binary MMCIF
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Structure Factors
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Validation File Zipped (.cif.gz)
SAH
SO4
Atom Indices
Bond Indices
Highlight Substructure
Structural Complex
Chemical ID:
SAH
IUPAC Name:
S-ADENOSYL-L-HOMOCYSTEINE
Formal Charge:
0
Type:
non-polymer
Substructure
Substruture Type:
MurckoScaffold
SMILES:
c1ncc2ncn([C@H]3CCCO3)c2n1
InChI:
InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1
InChI Key:
DAKONNSVCLKUJN-MRVPVSSYSA-N
Physiochemical Descriptor:
Formula:
C14 H20 N6 O5 S
Molecular weight:
384.411
Hydrogen Bond Acceptor:
12
Hydrogen Bond Donor:
5
Rotatable Bonds:
11
Heavy Atoms:
26
Systematic name
Program
Version
Descriptor
ACDLabs
10.04
(2S)-2-amino-4-({[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)butanoic acid (non-preferred name)
OpenEye OEToolkits
1.5.0
(2S)-2-amino-4-[[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methylsulfanyl]butanoic acid
Chemical Descriptors
Type
Program
Version
Descriptor
SMILES
ACDLabs
10.04
O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
SMILES_CANONICAL
CACTVS
3.341
N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
SMILES
CACTVS
3.341
N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
SMILES_CANONICAL
OpenEye OEToolkits
1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
SMILES
OpenEye OEToolkits
1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
InChI
InChI
1.03
InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKey
InChI
1.03
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
Chemical Database Mapping
Database
Reference ID
DrugBank
DB01752
ChEMBL
CHEMBL418052
PubChem
25246222
,
439155
ChEBI
16680
,
57856
ZINC
ZINC000004228232
SureChEMBL
SCHEMBL8836
HMDB
HMDB0000939
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