Structural Complex
Chemical ID: NCC
IUPAC Name: CYTIDINE-5'-MONOPHOSPHATE-5-N-ACETYLNEURAMINIC ACID
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1ncccn1[C@H]1CC[C@@H](CO[PH](=O)OC2CCCCO2)O1
InChI: InChI=1S/C14H21N2O6P/c17-14-15-7-3-8-16(14)12-6-5-11(21-12)10-20-23(18)22-13-4-1-2-9-19-13/h3,7-8,11-13,23H,1-2,4-6,9-10H2/t11-,12+,13?/m0/s1
InChI Key: VJVCWMJKEPRTCF-LAGVYOHYSA-N
Physiochemical Descriptor:
Formula: C20 H31 N4 O16 P
Molecular weight: 614.451
Hydrogen Bond Acceptor: 19
Hydrogen Bond Donor: 10
Rotatable Bonds: 20
Heavy Atoms: 41
Systematic name
Program Version Descriptor
ACDLabs 10.04 (2R,4S,5R,6R)-5-(acetylamino)-2-{[(S)-{[(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name)
OpenEye OEToolkits 1.5.0 (2R,4S,5R,6R)-5-acetamido-2-[[(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(NC1C(O)CC(OC1C(O)C(O)CO)(OP(=O)(O)OCC3OC(N2C(=O)N=C(N)C=C2)C(O)C3O)C(=O)O)C
SMILES_CANONICAL CACTVS 3.341 CC(=O)N[C@@H]1[C@@H](O)C[C@@](O[C@H]1[C@H](O)[C@H](O)CO)(O[P@](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=NC3=O)N)C(O)=O
SMILES CACTVS 3.341 CC(=O)N[CH]1[CH](O)C[C](O[CH]1[CH](O)[CH](O)CO)(O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=NC3=O)N)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 CC(=O)N[C@@H]1[C@H](C[C@](O[C@H]1[C@@H]([C@@H](CO)O)O)(C(=O)O)O[P@@](=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=NC3=O)N)O)O)O
SMILES OpenEye OEToolkits 1.5.0 CC(=O)NC1C(CC(OC1C(C(CO)O)O)(C(=O)O)OP(=O)(O)OCC2C(C(C(O2)N3C=CC(=NC3=O)N)O)O)O
InChI InChI 1.03 InChI=1S/C20H31N4O16P/c1-7(26)22-12-8(27)4-20(18(32)33,39-16(12)13(29)9(28)5-25)40-41(35,36)37-6-10-14(30)15(31)17(38-10)24-3-2-11(21)23-19(24)34/h2-3,8-10,12-17,25,27-31H,4-6H2,1H3,(H,22,26)(H,32,33)(H,35,36)(H2,21,23,34)/t8-,9+,10+,12+,13+,14+,15+,16+,17+,20+/m0/s1
InChIKey InChI 1.03 TXCIAUNLDRJGJZ-BILDWYJOSA-N
Chemical Database Mapping
Database Reference ID
DrugBank DB02485
ChEMBL CHEMBL1234647
PubChem 448209
ChEBI 16556
ZINC ZINC000008215638
SureChEMBL SCHEMBL122854
HMDB HMDB0001176