ISDA: 4Y4X

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: 47Q

IUPAC Name: 5-[(pyridin-2-ylmethyl)amino]-1,3-dihydro-2H-benzimidazol-2-one

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1[nH]c2ccc(NCc3ccccn3)cc2[nH]1

InChI: InChI=1S/C13H12N4O/c18-13-16-11-5-4-9(7-12(11)17-13)15-8-10-3-1-2-6-14-10/h1-7,15H,8H2,(H2,16,17,18)

InChI Key: MRKXGDLFRQWMOW-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C13 H12 N4 O

Molecular weight: 240.261

Hydrogen Bond Acceptor: 3

Hydrogen Bond Donor: 3

Rotatable Bonds: 3

Heavy Atoms: 18

Systematic name

Program	Version	Descriptor
ACDLabs	12.01	5-[(pyridin-2-ylmethyl)amino]-1,3-dihydro-2H-benzimidazol-2-one
OpenEye OEToolkits	1.9.2	5-(pyridin-2-ylmethylamino)-1,3-dihydrobenzimidazol-2-one

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C2Nc1ccc(cc1N2)NCc3ncccc3
InChI	InChI	1.03	InChI=1S/C13H12N4O/c18-13-16-11-5-4-9(7-12(11)17-13)15-8-10-3-1-2-6-14-10/h1-7,15H,8H2,(H2,16,17,18)
InChIKey	InChI	1.03	MRKXGDLFRQWMOW-UHFFFAOYSA-N
SMILES_CANONICAL	CACTVS	3.385	O=C1Nc2ccc(NCc3ccccn3)cc2N1
SMILES	CACTVS	3.385	O=C1Nc2ccc(NCc3ccccn3)cc2N1
SMILES_CANONICAL	OpenEye OEToolkits	1.9.2	c1ccnc(c1)CNc2ccc3c(c2)NC(=O)N3
SMILES	OpenEye OEToolkits	1.9.2	c1ccnc(c1)CNc2ccc3c(c2)NC(=O)N3

Chemical Database Mapping