Structural Complex
Chemical ID: IRN
IUPAC Name: 1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole
Formal Charge: 0
Type: RNA linking
Substructure
Substruture Type: MurckoScaffold
SMILES: c1cn([C@H]2CCCO2)cn1
InChI: InChI=1S/C7H10N2O/c1-2-7(10-5-1)9-4-3-8-6-9/h3-4,6-7H,1-2,5H2/t7-/m1/s1
InChI Key: JZCIGFQDEMYNPA-SSDOTTSWSA-N
Physiochemical Descriptor:
Formula: C8 H13 N2 O7 P
Molecular weight: 280.172
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 4
Rotatable Bonds: 8
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 10.04 1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole
OpenEye OEToolkits 1.5.0 [(2R,3S,4R,5R)-3,4-dihydroxy-5-imidazol-1-yl-oxolan-2-yl]methyl dihydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=P(O)(O)OCC2OC(n1cncc1)C(O)C2O
SMILES_CANONICAL CACTVS 3.341 O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2ccnc2
SMILES CACTVS 3.341 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2ccnc2
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 c1cn(cn1)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O
SMILES OpenEye OEToolkits 1.5.0 c1cn(cn1)C2C(C(C(O2)COP(=O)(O)O)O)O
InChI InChI 1.03 InChI=1S/C8H13N2O7P/c11-6-5(3-16-18(13,14)15)17-8(7(6)12)10-2-1-9-4-10/h1-2,4-8,11-12H,3H2,(H2,13,14,15)/t5-,6-,7-,8-/m1/s1
InChIKey InChI 1.03 YEBULYOZZUNFGU-WCTZXXKLSA-N
Chemical Database Mapping
Database Reference ID
PubChem 24971460
ZINC ZINC000058650251