Structural Complex
Chemical ID: 1SY
IUPAC Name: cGAMP
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1nc[nH]c2c1ncn2[C@@H]1O[C@@H]2CO[PH](=O)O[C@H]3C[C@H](n4cnc5cncnc54)O[C@@H]3CO[PH](=O)O[C@@H]1C2
InChI: InChI=1S/C20H22N8O9P2/c29-19-16-18(23-7-24-19)28(9-26-16)20-13-1-10(34-20)4-32-38(30)36-12-2-15(35-14(12)5-33-39(31)37-13)27-8-25-11-3-21-6-22-17(11)27/h3,6-10,12-15,20,38-39H,1-2,4-5H2,(H,23,24,29)/t10-,12-,13+,14+,15+,20+/m0/s1
InChI Key: GEUITLUDFDZHEA-JPQBJKNUSA-N
Physiochemical Descriptor:
Formula: C20 H24 N10 O13 P2
Molecular weight: 674.411
Hydrogen Bond Acceptor: 22
Hydrogen Bond Donor: 7
Rotatable Bonds: 8
Heavy Atoms: 45
Systematic name
Program Version Descriptor
ACDLabs 12.01 2-amino-9-[(2R,5R,7R,8R,10S,12aR,14R,15R,15aS,16R)-14-(6-amino-9H-purin-9-yl)-2,10,15,16-tetrahydroxy-2,10-dioxidooctahydro-12H-5,8-methanofuro[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecin-7-yl]-3,9-dihydro-6H-purin-6-one
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C7N=C(N)Nc1c7ncn1C5OC6COP(=O)(O)OC4C(OC(n2c3ncnc(N)c3nc2)C4O)COP(=O)(OC5C6O)O
InChI InChI 1.03 InChI=1S/C20H24N10O13P2/c21-14-8-15(24-3-23-14)29(4-25-8)18-11(32)12-7(41-18)2-39-45(36,37)43-13-10(31)6(1-38-44(34,35)42-12)40-19(13)30-5-26-9-16(30)27-20(22)28-17(9)33/h3-7,10-13,18-19,31-32H,1-2H2,(H,34,35)(H,36,37)(H2,21,23,24)(H3,22,27,28,33)/t6-,7-,10-,11-,12-,13-,18-,19-/m1/s1
InChIKey InChI 1.03 XRILCFTWUCUKJR-INFSMZHSSA-N
SMILES_CANONICAL CACTVS 3.370 NC1=NC(=O)c2ncn([C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]5[C@@H](O)[C@@H](O[C@@H]5CO[P](O)(=O)O[C@@H]3[C@@H]4O)n6cnc7c(N)ncnc67)c2N1
SMILES CACTVS 3.370 NC1=NC(=O)c2ncn([CH]3O[CH]4CO[P](O)(=O)O[CH]5[CH](O)[CH](O[CH]5CO[P](O)(=O)O[CH]3[CH]4O)n6cnc7c(N)ncnc67)c2N1
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O[C@@H]5[C@@H]([C@@H](COP(=O)(O4)O)O[C@H]5n6cnc7c6NC(=NC7=O)N)O)O)O)N
SMILES OpenEye OEToolkits 1.7.6 c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(C(COP(=O)(O4)O)OC5n6cnc7c6NC(=NC7=O)N)O)O)O)N
Chemical Database Mapping
Database Reference ID
ChEMBL CHEMBL4465054
PubChem 135564529
ChEBI 75947
ZINC ZINC000096095421
SureChEMBL SCHEMBL17325409,SCHEMBL24649405