Structural Complex
Chemical ID: WS3
IUPAC Name: 5'-deoxy-5'-[({6-[(alpha-D-galactopyranosyloxy)methyl]pyridin-2-yl}carbonyl)amino]uridine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=C(NC[C@@H]1CC[C@H](n2ccc(=O)[nH]c2=O)O1)c1cccc(CO[C@@H]2CCCCO2)n1
InChI: InChI=1S/C21H26N4O6/c26-17-9-10-25(21(28)24-17)18-8-7-15(31-18)12-22-20(27)16-5-3-4-14(23-16)13-30-19-6-1-2-11-29-19/h3-5,9-10,15,18-19H,1-2,6-8,11-13H2,(H,22,27)(H,24,26,28)/t15-,18+,19+/m0/s1
InChI Key: VRNKUFXLWHJROZ-KFKAGJAMSA-N
Physiochemical Descriptor:
Formula: C22 H28 N4 O12
Molecular weight: 540.477
Hydrogen Bond Acceptor: 14
Hydrogen Bond Donor: 8
Rotatable Bonds: 14
Heavy Atoms: 38
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-deoxy-5'-[({6-[(alpha-D-galactopyranosyloxy)methyl]pyridin-2-yl}carbonyl)amino]uridine
OpenEye OEToolkits 1.7.6 N-[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-6-[[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]pyridine-2-carboxamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C1C=CN(C(=O)N1)C2OC(C(O)C2O)CNC(=O)c3nc(ccc3)COC4OC(C(O)C(O)C4O)CO
InChI InChI 1.03 InChI=1S/C22H28N4O12/c27-7-12-15(30)16(31)18(33)21(38-12)36-8-9-2-1-3-10(24-9)19(34)23-6-11-14(29)17(32)20(37-11)26-5-4-13(28)25-22(26)35/h1-5,11-12,14-18,20-21,27,29-33H,6-8H2,(H,23,34)(H,25,28,35)/t11-,12-,14-,15+,16+,17-,18-,20-,21+/m1/s1
InChIKey InChI 1.03 KPOTWZYLDCHCIG-DSVOXYOZSA-N
SMILES_CANONICAL CACTVS 3.385 OC[C@H]1O[C@H](OCc2cccc(n2)C(=O)NC[C@H]3O[C@H]([C@H](O)[C@@H]3O)N4C=CC(=O)NC4=O)[C@H](O)[C@@H](O)[C@H]1O
SMILES CACTVS 3.385 OC[CH]1O[CH](OCc2cccc(n2)C(=O)NC[CH]3O[CH]([CH](O)[CH]3O)N4C=CC(=O)NC4=O)[CH](O)[CH](O)[CH]1O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 c1cc(nc(c1)C(=O)NC[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)O)CO[C@@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O
SMILES OpenEye OEToolkits 1.7.6 c1cc(nc(c1)C(=O)NCC2C(C(C(O2)N3C=CC(=O)NC3=O)O)O)COC4C(C(C(C(O4)CO)O)O)O
Chemical Database Mapping
Database Reference ID
PubChem 73213222
ZINC ZINC000098209586