Structural Complex
Chemical ID: KDN
IUPAC Name: deamino-beta-neuraminic acid
Formal Charge: 0
Type: D-saccharide, beta linking
Substructure
Substruture Type: MurckoScaffold
SMILES: C1CCOCC1
InChI: InChI=1S/C5H10O/c1-2-4-6-5-3-1/h1-5H2
InChI Key: DHXVGJBLRPWPCS-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C9 H16 O9
Molecular weight: 268.218
Hydrogen Bond Acceptor: 9
Hydrogen Bond Donor: 7
Rotatable Bonds: 10
Heavy Atoms: 18
Systematic name
Program Version Descriptor
ACDLabs 10.04 3-deoxy-D-glycero-beta-D-galacto-non-2-ulopyranosonic acid
OpenEye OEToolkits 1.5.0 (2S,4S,5R,6R)-2,4,5-trihydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid
GMML 1.0 DKdnpb
GMML 1.0 2-keto-3-deoxy-b-D-nonulopyranosic acid
PDB-CARE 1.0 b-D-Kdnp
GMML 1.0 Kdn
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 10.04 O=C(O)C1(O)OC(C(O)C(O)CO)C(O)C(O)C1
SMILES_CANONICAL CACTVS 3.341 OC[C@@H](O)[C@@H](O)[C@@H]1O[C@@](O)(C[C@H](O)[C@H]1O)C(O)=O
SMILES CACTVS 3.341 OC[CH](O)[CH](O)[CH]1O[C](O)(C[CH](O)[CH]1O)C(O)=O
SMILES_CANONICAL OpenEye OEToolkits 1.5.0 C1[C@@H]([C@H]([C@@H](O[C@@]1(C(=O)O)O)[C@@H]([C@@H](CO)O)O)O)O
SMILES OpenEye OEToolkits 1.5.0 C1C(C(C(OC1(C(=O)O)O)C(C(CO)O)O)O)O
InChI InChI 1.03 InChI=1S/C9H16O9/c10-2-4(12)6(14)7-5(13)3(11)1-9(17,18-7)8(15)16/h3-7,10-14,17H,1-2H2,(H,15,16)/t3-,4+,5+,6+,7+,9-/m0/s1
InChIKey InChI 1.03 CLRLHXKNIYJWAW-YOQZMRDMSA-N
Chemical Database Mapping
Database Reference ID
PubChem 10869261
ChEBI 131593
ZINC ZINC000013436054