ISDA: 4CWA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: JA2

IUPAC Name: 5-(1H-benzimidazol-2-yl)pentan-1-amine

Formal Charge: 0

Type: NON-POLYMER

Substructure

Substruture Type: MurckoScaffold

SMILES: c1ccc2[nH]cnc2c1

InChI: InChI=1S/C7H6N2/c1-2-4-7-6(3-1)8-5-9-7/h1-5H,(H,8,9)

InChI Key: HYZJCKYKOHLVJF-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C12 H17 N3

Molecular weight: 203.283

Hydrogen Bond Acceptor: 2

Hydrogen Bond Donor: 2

Rotatable Bonds: 6

Heavy Atoms: 15

Systematic name

Program	Version	Descriptor
ACDLabs	12.01	5-(1H-benzimidazol-2-yl)pentan-1-amine
OpenEye OEToolkits	1.7.6	5-(1H-benzimidazol-2-yl)pentan-1-amine

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	n2c1ccccc1nc2CCCCCN
InChI	InChI	1.03	InChI=1S/C12H17N3/c13-9-5-1-2-8-12-14-10-6-3-4-7-11(10)15-12/h3-4,6-7H,1-2,5,8-9,13H2,(H,14,15)
InChIKey	InChI	1.03	XTJRXHPNZGDOGE-UHFFFAOYSA-N
SMILES_CANONICAL	CACTVS	3.385	NCCCCCc1[nH]c2ccccc2n1
SMILES	CACTVS	3.385	NCCCCCc1[nH]c2ccccc2n1
SMILES_CANONICAL	OpenEye OEToolkits	1.7.6	c1ccc2c(c1)[nH]c(n2)CCCCCN
SMILES	OpenEye OEToolkits	1.7.6	c1ccc2c(c1)[nH]c(n2)CCCCCN

Chemical Database Mapping