Structural Complex
Chemical ID: RPO
IUPAC Name: (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-4-O-benzyl-2-deoxy-alpha-D-glucopyranoside
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc(CO[C@H]2CC[C@@H](O[C@@H]3CCCC[C@H]3O[C@H]3C[C@H](O[C@@H]4CCCCO4)CO3)OC2)cc1
InChI: InChI=1S/C27H40O7/c1-2-8-20(9-3-1)17-29-21-13-14-26(30-18-21)33-23-10-4-5-11-24(23)34-27-16-22(19-31-27)32-25-12-6-7-15-28-25/h1-3,8-9,21-27H,4-7,10-19H2/t21-,22-,23+,24+,25+,26+,27-/m0/s1
InChI Key: RYIUORNZYNVTGO-VMZVVKDESA-N
Physiochemical Descriptor:
Formula: C30 H51 N5 O14
Molecular weight: 705.751
Hydrogen Bond Acceptor: 19
Hydrogen Bond Donor: 12
Rotatable Bonds: 24
Heavy Atoms: 49
Systematic name
Program Version Descriptor
ACDLabs 12.01 (1R,2R,3S,4R,6S)-4,6-diamino-2-{[3-O-(2,6-diamino-2,6-dideoxy-beta-L-idopyranosyl)-beta-D-ribofuranosyl]oxy}-3-hydroxycyclohexyl 2-amino-4-O-benzyl-2-deoxy-alpha-D-glucopyranoside
OpenEye OEToolkits 1.7.6 (2S,3S,4R,5R,6R)-2-(aminomethyl)-5-azanyl-6-[(2R,3S,4R,5S)-5-[(1R,2R,3S,5R,6S)-3,5-bis(azanyl)-2-[(2S,3R,4R,5S,6R)-3-azanyl-6-(hydroxymethyl)-4-oxidanyl-5-phenylmethoxy-oxan-2-yl]oxy-6-oxidanyl-cyclohexyl]oxy-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl]oxy-oxane-3,4-diol
Chemical Descriptors
Type Program Version Descriptor
InChI InChI 1.03 InChI=1S/C30H51N5O14/c31-7-14-20(39)21(40)17(34)28(44-14)48-26-16(9-37)46-30(23(26)42)49-27-19(38)12(32)6-13(33)24(27)47-29-18(35)22(41)25(15(8-36)45-29)43-10-11-4-2-1-3-5-11/h1-5,12-30,36-42H,6-10,31-35H2/t12-,13+,14+,15-,16-,17-,18-,19+,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30+/m1/s1
InChIKey InChI 1.03 DRHDMQJFWDZMND-JCNXQQRHSA-N
SMILES ACDLabs 12.01 O(C3C(OC2OC(CO)C(OCc1ccccc1)C(O)C2N)C(N)CC(N)C3O)C5OC(C(OC4OC(CN)C(O)C(O)C4N)C5O)CO
SMILES_CANONICAL CACTVS 3.370 NC[C@@H]1O[C@H](O[C@@H]2[C@@H](CO)O[C@@H](O[C@@H]3[C@@H](O)[C@H](N)C[C@H](N)[C@H]3O[C@H]4O[C@H](CO)[C@@H](OCc5ccccc5)[C@H](O)[C@H]4N)[C@@H]2O)[C@H](N)[C@@H](O)[C@@H]1O
SMILES CACTVS 3.370 NC[CH]1O[CH](O[CH]2[CH](CO)O[CH](O[CH]3[CH](O)[CH](N)C[CH](N)[CH]3O[CH]4O[CH](CO)[CH](OCc5ccccc5)[CH](O)[CH]4N)[CH]2O)[CH](N)[CH](O)[CH]1O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 c1ccc(cc1)CO[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)N)O[C@@H]3[C@H](C[C@H]([C@@H]([C@H]3O[C@H]4[C@@H]([C@@H]([C@H](O4)CO)O[C@@H]5[C@@H]([C@H]([C@@H]([C@@H](O5)CN)O)O)N)O)O)N)N)CO
SMILES OpenEye OEToolkits 1.7.6 c1ccc(cc1)COC2C(OC(C(C2O)N)OC3C(CC(C(C3OC4C(C(C(O4)CO)OC5C(C(C(C(O5)CN)O)O)N)O)O)N)N)CO
Chemical Database Mapping
Database Reference ID
PubChem 71627367
ZINC ZINC000098209374
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