ISDA

Atom Indices

Bond Indices

Highlight Substructure

Structural Complex

Chemical ID: VWN

IUPAC Name: 2-[(1-methyl-1H-benzimidazol-2-yl)methyl]-6-morpholin-4-ylpyrimidin-4(3H)-one

Formal Charge: 0

Type: non-polymer

Substructure

Substruture Type: MurckoScaffold

SMILES: O=c1cc(N2CCOCC2)nc(Cc2nc3ccccc3[nH]2)[nH]1

InChI: InChI=1S/C16H17N5O2/c22-16-10-15(21-5-7-23-8-6-21)19-14(20-16)9-13-17-11-3-1-2-4-12(11)18-13/h1-4,10H,5-9H2,(H,17,18)(H,19,20,22)

InChI Key: ZXWKRHZKUQDVJE-UHFFFAOYSA-N

Physiochemical Descriptor:

Formula: C17 H19 N5 O2

Molecular weight: 325.365

Hydrogen Bond Acceptor: 6

Hydrogen Bond Donor: 1

Rotatable Bonds: 4

Heavy Atoms: 24

Systematic name

Program	Version	Descriptor
ACDLabs	12.01	2-[(1-methyl-1H-benzimidazol-2-yl)methyl]-6-(morpholin-4-yl)pyrimidin-4(3H)-one
OpenEye OEToolkits	1.9.2	2-[(1-methylbenzimidazol-2-yl)methyl]-4-morpholin-4-yl-1H-pyrimidin-6-one

Chemical Descriptors

Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C1C=C(N=C(N1)Cc3nc2ccccc2n3C)N4CCOCC4
InChI	InChI	1.03	InChI=1S/C17H19N5O2/c1-21-13-5-3-2-4-12(13)18-15(21)10-14-19-16(11-17(23)20-14)22-6-8-24-9-7-22/h2-5,11H,6-10H2,1H3,(H,19,20,23)
InChIKey	InChI	1.03	XLESLWHDVUIEMT-UHFFFAOYSA-N
SMILES_CANONICAL	CACTVS	3.385	Cn1c(CC2=NC(=CC(=O)N2)N3CCOCC3)nc4ccccc14
SMILES	CACTVS	3.385	Cn1c(CC2=NC(=CC(=O)N2)N3CCOCC3)nc4ccccc14
SMILES_CANONICAL	OpenEye OEToolkits	1.9.2	Cn1c2ccccc2nc1CC3=NC(=CC(=O)N3)N4CCOCC4
SMILES	OpenEye OEToolkits	1.9.2	Cn1c2ccccc2nc1CC3=NC(=CC(=O)N3)N4CCOCC4

Chemical Database Mapping