Structural Complex
Chemical ID: TD9
IUPAC Name: (5S)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate
Formal Charge: 1
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ncc(C[n+]2ccsc2)cn1
InChI: InChI=1S/C8H8N3S/c1-2-12-7-11(1)5-8-3-9-6-10-4-8/h1-4,6-7H,5H2/q+1
InChI Key: VOZNMBMJVMRVOB-UHFFFAOYSA-N
Physiochemical Descriptor:
Formula: C17 H27 N4 O10 P2 S
Molecular weight: 541.430
Hydrogen Bond Acceptor: 14
Hydrogen Bond Donor: 6
Rotatable Bonds: 20
Heavy Atoms: 34
Systematic name
Program Version Descriptor
ACDLabs 12.01 (5S)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate
OpenEye OEToolkits 1.7.6 (5S)-5-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-1,3-thiazol-3-ium-2-yl]-5-oxidanyl-pentanoic acid
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 [O-]C(=O)CCCC(O)c1sc(c([n+]1Cc2cnc(nc2N)C)C)CCOP([O-])(=O)OP([O-])([O-])=O
InChI InChI 1.03 InChI=1S/C17H26N4O10P2S/c1-10-14(6-7-30-33(28,29)31-32(25,26)27)34-17(13(22)4-3-5-15(23)24)21(10)9-12-8-19-11(2)20-16(12)18/h8,13,22H,3-7,9H2,1-2H3,(H5-,18,19,20,23,24,25,26,27,28,29)/p-3/t13-/m0/s1
InChIKey InChI 1.03 WMOBQHPEAJZBCW-ZDUSSCGKSA-K
SMILES_CANONICAL CACTVS 3.370 Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)(O)=O)sc2[C@@H](O)CCCC(O)=O)c(N)n1
SMILES CACTVS 3.370 Cc1ncc(C[n+]2c(C)c(CCO[P](O)(=O)O[P](O)(O)=O)sc2[CH](O)CCCC(O)=O)c(N)n1
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C@H](CCCC(=O)O)O)CCOP(=O)(O)OP(=O)(O)O
SMILES OpenEye OEToolkits 1.7.6 Cc1c(sc([n+]1Cc2cnc(nc2N)C)C(CCCC(=O)O)O)CCOP(=O)(O)OP(=O)(O)O