Structural Complex
Chemical ID: ZPA
IUPAC Name: 4-(N-benzylsuccinimide-3-sulfanyl)-N-(6-O-beta-D-xylopyranosyl-beta-D-glucopyranosyl)butylamidine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: N=C(CCCS[C@@H]1CC(=O)N(Cc2ccccc2)C1=O)N[C@H]1CCC[C@@H](CO[C@H]2CCCCO2)O1
InChI: InChI=1S/C26H37N3O5S/c27-22(28-23-12-6-10-20(34-23)18-33-25-13-4-5-14-32-25)11-7-15-35-21-16-24(30)29(26(21)31)17-19-8-2-1-3-9-19/h1-3,8-9,20-21,23,25H,4-7,10-18H2,(H2,27,28)/t20-,21+,23+,25-/m0/s1
InChI Key: CZOPBRKZXSCQMB-JIEYXDDVSA-N
Physiochemical Descriptor:
Formula: C26 H37 N3 O11 S
Molecular weight: 599.650
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 8
Rotatable Bonds: 17
Heavy Atoms: 41
Systematic name
Program Version Descriptor
ACDLabs 12.01 N-[(1Z)-4-{[(3R)-1-benzyl-2,5-dioxopyrrolidin-3-yl]sulfanyl}butanimidoyl]-6-O-beta-D-xylopyranosyl-beta-D-glucopyranosylamine
OpenEye OEToolkits 1.7.6 4-[(3R)-2,5-bis(oxidanylidene)-1-(phenylmethyl)pyrrolidin-3-yl]sulfanyl-N-[(2R,3R,4S,5S,6R)-3,4,5-tris(oxidanyl)-6-[[(2S,3R,4S,5R)-3,4,5-tris(oxidanyl)oxan-2-yl]oxymethyl]oxan-2-yl]butanimidamide
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C3N(C(=O)CC3SCCCC(=[N@H])NC2OC(COC1OCC(O)C(O)C1O)C(O)C(O)C2O)Cc4ccccc4
InChI InChI 1.03 InChI=1S/C26H37N3O11S/c27-17(7-4-8-41-16-9-18(31)29(25(16)37)10-13-5-2-1-3-6-13)28-24-22(35)21(34)20(33)15(40-24)12-39-26-23(36)19(32)14(30)11-38-26/h1-3,5-6,14-16,19-24,26,30,32-36H,4,7-12H2,(H2,27,28)/t14-,15-,16-,19+,20-,21+,22-,23-,24-,26+/m1/s1
InChIKey InChI 1.03 MKGCRBLJKRCKKQ-OGJWHHEUSA-N
SMILES_CANONICAL CACTVS 3.385 O[C@@H]1CO[C@@H](OC[C@H]2O[C@@H](NC(=N)CCCS[C@@H]3CC(=O)N(Cc4ccccc4)C3=O)[C@H](O)[C@@H](O)[C@@H]2O)[C@H](O)[C@H]1O
SMILES CACTVS 3.385 O[CH]1CO[CH](OC[CH]2O[CH](NC(=N)CCCS[CH]3CC(=O)N(Cc4ccccc4)C3=O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 [H]/N=C(/CCCS[C@@H]1CC(=O)N(C1=O)Cc2ccccc2)\N[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO[C@H]4[C@@H]([C@H]([C@@H](CO4)O)O)O)O)O)O
SMILES OpenEye OEToolkits 1.7.6 c1ccc(cc1)CN2C(=O)CC(C2=O)SCCCC(=N)NC3C(C(C(C(O3)COC4C(C(C(CO4)O)O)O)O)O)O
Chemical Database Mapping
Database Reference ID
PubChem 139033518,73659099
ZINC ZINC000098209670
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