Structural Complex
Chemical ID: YGP
IUPAC Name: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: O=c1cc(O[PH](=O)OC[C@@H]2CC[C@H](n3cnc4c(=O)[nH]cnc43)O2)cc[nH]1
InChI: InChI=1S/C15H16N5O6P/c21-11-5-9(3-4-16-11)26-27(23)24-6-10-1-2-12(25-10)20-8-19-13-14(20)17-7-18-15(13)22/h3-5,7-8,10,12,27H,1-2,6H2,(H,16,21)(H,17,18,22)/t10-,12+/m0/s1
InChI Key: MMGAQJJWNOKIRP-CMPLNLGQSA-N
Physiochemical Descriptor:
Formula: C17 H21 N6 O9 P
Molecular weight: 484.357
Hydrogen Bond Acceptor: 13
Hydrogen Bond Donor: 6
Rotatable Bonds: 12
Heavy Atoms: 33
Systematic name
Program Version Descriptor
ACDLabs 12.01 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine
OpenEye OEToolkits 1.7.6 [(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl (3,6-dimethyl-2-oxidanylidene-1H-pyridin-4-yl) hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 O=C4NC(=CC(OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O)=C4C)C
InChI InChI 1.03 InChI=1S/C17H21N6O9P/c1-6-3-8(7(2)14(26)20-6)32-33(28,29)30-4-9-11(24)12(25)16(31-9)23-5-19-10-13(23)21-17(18)22-15(10)27/h3,5,9,11-12,16,24-25H,4H2,1-2H3,(H,20,26)(H,28,29)(H3,18,21,22,27)/t9-,11-,12-,16-/m1/s1
InChIKey InChI 1.03 SHYVQHDJQQBUQP-UBEDBUPSSA-N
SMILES_CANONICAL CACTVS 3.385 CC1=CC(=C(C)C(=O)N1)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4C(=O)NC(=Nc34)N
SMILES CACTVS 3.385 CC1=CC(=C(C)C(=O)N1)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4C(=O)NC(=Nc34)N
SMILES_CANONICAL OpenEye OEToolkits 1.7.6 CC1=CC(=C(C(=O)N1)C)OP(=O)(O)OC[C@@H]2[C@H]([C@H]([C@@H](O2)n3cnc4c3N=C(NC4=O)N)O)O
SMILES OpenEye OEToolkits 1.7.6 CC1=CC(=C(C(=O)N1)C)OP(=O)(O)OCC2C(C(C(O2)n3cnc4c3N=C(NC4=O)N)O)O
Chemical Database Mapping
Database Reference ID
PubChem 135566624
ZINC ZINC000098209637