Structural Complex
Chemical ID: N5P
IUPAC Name: 1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO -1H-INDOLE
Formal Charge: 0
Type: NON-POLYMER
Substructure
Substruture Type: MurckoScaffold
SMILES: c1ccc2c(c1)ccn2[C@H]1CCCO1
InChI: InChI=1S/C12H13NO/c1-2-5-11-10(4-1)7-8-13(11)12-6-3-9-14-12/h1-2,4-5,7-8,12H,3,6,9H2/t12-/m1/s1
InChI Key: UTEDPNLNJBYVSG-GFCCVEGCSA-N
Physiochemical Descriptor:
Formula: C13 H17 N2 O14 P3
Molecular weight: 518.200
Hydrogen Bond Acceptor: 15
Hydrogen Bond Donor: 5
Rotatable Bonds: 14
Heavy Atoms: 32
Systematic name
Program Version Descriptor
ACDLabs 12.01 1-{2-deoxy-5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-5-nitro-1H-indole
OpenEye OEToolkits 1.7.2 [[5-(5-nitroindol-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
Chemical Descriptors
Type Program Version Descriptor
SMILES ACDLabs 12.01 [O-][N+](=O)c2cc1ccn(c1cc2)C3OC(C(O)C3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O
InChI InChI 1.03 InChI=1S/C13H17N2O14P3/c16-11-6-13(14-4-3-8-5-9(15(17)18)1-2-10(8)14)27-12(11)7-26-31(22,23)29-32(24,25)28-30(19,20)21/h1-5,11-13,16H,6-7H2,(H,22,23)(H,24,25)(H2,19,20,21)/t11-,12+,13+/m0/s1
InChIKey InChI 1.03 JJJBDAFRCKSXDR-YNEHKIRRSA-N
SMILES_CANONICAL CACTVS 3.370 O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)n2ccc3cc(ccc23)[N+]([O-])=O
SMILES CACTVS 3.370 O[CH]1C[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)n2ccc3cc(ccc23)[N+]([O-])=O
SMILES_CANONICAL OpenEye OEToolkits 1.7.2 c1cc2c(ccn2C3CC(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)cc1[N+](=O)[O-]
SMILES OpenEye OEToolkits 1.7.2 c1cc2c(ccn2C3CC(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)cc1[N+](=O)[O-]
Chemical Database Mapping
Database Reference ID
PubChem 15374177
ZINC ZINC000059142887